Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.74■□□□□ 0.27
CDRT1O95170 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDRT1O95170 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDRT1O95170 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.73■□□□□ 0.27
CDRT1O95170 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CDRT1O95170 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.73■□□□□ 0.27
CDRT1O95170 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.73■□□□□ 0.27
CDRT1O95170 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.73■□□□□ 0.27
CDRT1O95170 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.73■□□□□ 0.27
CDRT1O95170 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.73■□□□□ 0.27
CDRT1O95170 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.73■□□□□ 0.27
CDRT1O95170 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.73■□□□□ 0.27
CDRT1O95170 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDRT1O95170 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.72■□□□□ 0.27
CDRT1O95170 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 GPX1P1-201ENST00000388829 606 ntBASIC16.72■□□□□ 0.27
CDRT1O95170 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.72■□□□□ 0.27
CDRT1O95170 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDRT1O95170 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CDRT1O95170 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDRT1O95170 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.71■□□□□ 0.27
CDRT1O95170 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.71■□□□□ 0.27
CDRT1O95170 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.71■□□□□ 0.27
CDRT1O95170 AC022517.1-201ENST00000592429 346 ntBASIC16.71■□□□□ 0.27
CDRT1O95170 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.71■□□□□ 0.27
CDRT1O95170 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CDRT1O95170 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.71■□□□□ 0.27
CDRT1O95170 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDRT1O95170 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDRT1O95170 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDRT1O95170 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDRT1O95170 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CDRT1O95170 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CDRT1O95170 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.7■□□□□ 0.26
CDRT1O95170 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.7■□□□□ 0.26
CDRT1O95170 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.7■□□□□ 0.26
CDRT1O95170 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDRT1O95170 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms