Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.98■□□□□ 0.63
USP1O94782 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.98■□□□□ 0.63
USP1O94782 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.98■□□□□ 0.63
USP1O94782 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 RPS2P4-201ENST00000476944 856 ntBASIC18.98■□□□□ 0.63
USP1O94782 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.98■□□□□ 0.63
USP1O94782 RPPH1-201ENST00000516869 333 ntBASIC18.98■□□□□ 0.63
USP1O94782 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.98■□□□□ 0.63
USP1O94782 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.98■□□□□ 0.63
USP1O94782 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.98■□□□□ 0.63
USP1O94782 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.98■□□□□ 0.63
USP1O94782 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
USP1O94782 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
USP1O94782 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.98■□□□□ 0.63
USP1O94782 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
USP1O94782 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
USP1O94782 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
USP1O94782 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.97■□□□□ 0.63
USP1O94782 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 AC135050.7-201ENST00000624508 2218 ntBASIC18.97■□□□□ 0.63
USP1O94782 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.97■□□□□ 0.63
USP1O94782 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 AC091390.4-202ENST00000476426 537 ntBASIC18.97■□□□□ 0.63
USP1O94782 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
USP1O94782 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
USP1O94782 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.97■□□□□ 0.63
USP1O94782 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.97■□□□□ 0.63
USP1O94782 AC068587.9-201ENST00000641814 219 ntBASIC18.97■□□□□ 0.63
USP1O94782 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.97■□□□□ 0.63
USP1O94782 KRT16P1-201ENST00000399124 1418 ntBASIC18.97■□□□□ 0.63
USP1O94782 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP1O94782 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP1O94782 AC079598.2-202ENST00000546624 1451 ntBASIC18.97■□□□□ 0.63
USP1O94782 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP1O94782 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 AC004951.3-201ENST00000418645 1148 ntBASIC18.96■□□□□ 0.63
USP1O94782 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
USP1O94782 AC093827.2-201ENST00000512654 315 ntBASIC18.96■□□□□ 0.63
USP1O94782 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.96■□□□□ 0.63
USP1O94782 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.96■□□□□ 0.63
USP1O94782 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.96■□□□□ 0.63
USP1O94782 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.96■□□□□ 0.63
USP1O94782 AC026271.3-201ENST00000571884 352 ntBASIC18.96■□□□□ 0.63
USP1O94782 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.96■□□□□ 0.63
USP1O94782 AP006294.2-201ENST00000641667 209 ntBASIC18.96■□□□□ 0.63
USP1O94782 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 KRT8P3-201ENST00000519669 1449 ntBASIC18.96■□□□□ 0.63
USP1O94782 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.96■□□□□ 0.63
USP1O94782 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.96■□□□□ 0.63
USP1O94782 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.96■□□□□ 0.63
USP1O94782 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP1O94782 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP1O94782 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.95■□□□□ 0.62
USP1O94782 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
USP1O94782 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.95■□□□□ 0.62
USP1O94782 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP1O94782 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
USP1O94782 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms