Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.28■■□□□ 1
CCNT1O60563 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.28■■□□□ 1
CCNT1O60563 MIR3180-5-201ENST00000583743 153 ntBASIC21.28■■□□□ 1
CCNT1O60563 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CCNT1O60563 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
CCNT1O60563 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.28■■□□□ 1
CCNT1O60563 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.28■■□□□ 1
CCNT1O60563 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.28■■□□□ 1
CCNT1O60563 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.27■■□□□ 1
CCNT1O60563 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.27■■□□□ 1
CCNT1O60563 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.27■■□□□ 1
CCNT1O60563 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.27■■□□□ 1
CCNT1O60563 SLC25A3P1-201ENST00000443844 931 ntBASIC21.27■■□□□ 1
CCNT1O60563 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.27■■□□□ 1
CCNT1O60563 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.27■■□□□ 1
CCNT1O60563 CR769767.2-201ENST00000622735 460 ntBASIC21.27■■□□□ 1
CCNT1O60563 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCNT1O60563 Z98044.1-201ENST00000632503 1764 ntBASIC21.27■■□□□ 1
CCNT1O60563 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCNT1O60563 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCNT1O60563 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCNT1O60563 ANO7L1-203ENST00000602586 1720 ntBASIC21.26■□□□□ 0.99
CCNT1O60563 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.26■□□□□ 0.99
CCNT1O60563 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNT1O60563 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
CCNT1O60563 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNT1O60563 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNT1O60563 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CCNT1O60563 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.26■□□□□ 0.99
CCNT1O60563 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.26■□□□□ 0.99
CCNT1O60563 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CCNT1O60563 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCNT1O60563 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CCNT1O60563 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNT1O60563 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNT1O60563 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNT1O60563 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.25■□□□□ 0.99
CCNT1O60563 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.25■□□□□ 0.99
CCNT1O60563 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNT1O60563 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCNT1O60563 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.25■□□□□ 0.99
CCNT1O60563 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.25■□□□□ 0.99
CCNT1O60563 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCNT1O60563 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCNT1O60563 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CCNT1O60563 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CCNT1O60563 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCNT1O60563 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 MIR564-202ENST00000385049 94 ntBASIC21.24■□□□□ 0.99
CCNT1O60563 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCNT1O60563 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.24■□□□□ 0.99
CCNT1O60563 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.24■□□□□ 0.99
CCNT1O60563 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 AC005363.2-201ENST00000618631 242 ntBASIC21.24■□□□□ 0.99
CCNT1O60563 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
CCNT1O60563 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCNT1O60563 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms