Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTLC1O15269 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTLC1O15269 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.07■□□□□ 0.8
SPTLC1O15269 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SPTLC1O15269 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC1O15269 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.06■□□□□ 0.8
SPTLC1O15269 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.06■□□□□ 0.8
SPTLC1O15269 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 SPDYE15P-201ENST00000424157 909 ntBASIC20.06■□□□□ 0.8
SPTLC1O15269 HOMER2P1-201ENST00000455653 964 ntBASIC20.06■□□□□ 0.8
SPTLC1O15269 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.06■□□□□ 0.8
SPTLC1O15269 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC1O15269 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC1O15269 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SPTLC1O15269 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SPTLC1O15269 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTLC1O15269 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.06■□□□□ 0.8
SPTLC1O15269 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC1O15269 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
SPTLC1O15269 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.05■□□□□ 0.8
SPTLC1O15269 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC1O15269 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC1O15269 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC1O15269 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC1O15269 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC1O15269 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SPTLC1O15269 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC1O15269 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.04■□□□□ 0.8
SPTLC1O15269 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.04■□□□□ 0.8
SPTLC1O15269 MIR564-202ENST00000385049 94 ntBASIC20.04■□□□□ 0.8
SPTLC1O15269 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SPTLC1O15269 KRT18P48-201ENST00000434763 852 ntBASIC20.04■□□□□ 0.8
SPTLC1O15269 SEC1P-202ENST00000473944 940 ntBASIC20.04■□□□□ 0.8
SPTLC1O15269 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.04■□□□□ 0.8
SPTLC1O15269 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SPTLC1O15269 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.04■□□□□ 0.8
SPTLC1O15269 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC1O15269 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.04■□□□□ 0.8
SPTLC1O15269 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC1O15269 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC1O15269 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SPTLC1O15269 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
SPTLC1O15269 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
SPTLC1O15269 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC1O15269 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms