Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPEO14579 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.78■□□□□ 0.6
COPEO14579 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPEO14579 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.78■□□□□ 0.6
COPEO14579 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.77■□□□□ 0.6
COPEO14579 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.77■□□□□ 0.6
COPEO14579 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 FZD10-202ENST00000539839 3282 ntBASIC18.77■□□□□ 0.6
COPEO14579 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COPEO14579 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.77■□□□□ 0.6
COPEO14579 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.77■□□□□ 0.6
COPEO14579 SOX15-203ENST00000570788 1093 ntBASIC18.77■□□□□ 0.6
COPEO14579 MIR4758-201ENST00000577688 71 ntBASIC18.77■□□□□ 0.6
COPEO14579 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPEO14579 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COPEO14579 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.77■□□□□ 0.59
COPEO14579 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.77■□□□□ 0.59
COPEO14579 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
COPEO14579 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPEO14579 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.76■□□□□ 0.59
COPEO14579 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.76■□□□□ 0.59
COPEO14579 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
COPEO14579 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.76■□□□□ 0.59
COPEO14579 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
COPEO14579 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COPEO14579 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.76■□□□□ 0.59
COPEO14579 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.76■□□□□ 0.59
COPEO14579 AC008687.6-201ENST00000596318 630 ntBASIC18.76■□□□□ 0.59
COPEO14579 IKBKGP1-201ENST00000612193 1073 ntBASIC18.76■□□□□ 0.59
COPEO14579 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 MYC-209ENST00000641252 345 ntBASIC18.76■□□□□ 0.59
COPEO14579 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COPEO14579 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPEO14579 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
COPEO14579 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COPEO14579 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COPEO14579 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.75■□□□□ 0.59
COPEO14579 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COPEO14579 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 AC006970.2-201ENST00000450065 779 ntBASIC18.75■□□□□ 0.59
COPEO14579 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.75■□□□□ 0.59
COPEO14579 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COPEO14579 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.75■□□□□ 0.59
COPEO14579 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COPEO14579 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 AC008764.6-201ENST00000595909 2069 ntBASIC18.75■□□□□ 0.59
COPEO14579 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPEO14579 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms