Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDC7O00311 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CDC7O00311 AC012618.2-201ENST00000428058 849 ntBASIC18.42■□□□□ 0.54
CDC7O00311 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 AC116562.2-201ENST00000507042 360 ntBASIC18.42■□□□□ 0.54
CDC7O00311 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.42■□□□□ 0.54
CDC7O00311 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.42■□□□□ 0.54
CDC7O00311 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.42■□□□□ 0.54
CDC7O00311 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDC7O00311 Z99916.2-201ENST00000604037 246 ntBASIC18.42■□□□□ 0.54
CDC7O00311 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.42■□□□□ 0.54
CDC7O00311 AL049637.2-201ENST00000641778 930 ntBASIC18.42■□□□□ 0.54
CDC7O00311 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.42■□□□□ 0.54
CDC7O00311 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDC7O00311 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDC7O00311 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDC7O00311 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.42■□□□□ 0.54
CDC7O00311 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDC7O00311 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC7O00311 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDC7O00311 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC7O00311 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC7O00311 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 RCC2P3-201ENST00000418112 1537 ntBASIC18.41■□□□□ 0.54
CDC7O00311 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.41■□□□□ 0.54
CDC7O00311 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.41■□□□□ 0.54
CDC7O00311 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.41■□□□□ 0.54
CDC7O00311 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 SLC25A1P4-201ENST00000567977 778 ntBASIC18.41■□□□□ 0.54
CDC7O00311 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 AL357033.4-201ENST00000617703 1807 ntBASIC18.41■□□□□ 0.54
CDC7O00311 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC7O00311 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC7O00311 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC7O00311 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC7O00311 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC7O00311 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC7O00311 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC7O00311 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC7O00311 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC7O00311 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC7O00311 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CDC7O00311 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC7O00311 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC7O00311 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.4■□□□□ 0.54
CDC7O00311 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC7O00311 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
CDC7O00311 AC008622.2-201ENST00000617006 1229 ntBASIC18.4■□□□□ 0.54
CDC7O00311 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.4■□□□□ 0.54
CDC7O00311 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC7O00311 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC7O00311 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC7O00311 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC7O00311 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC7O00311 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDC7O00311 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CDC7O00311 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDC7O00311 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC7O00311 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC7O00311 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC7O00311 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.39■□□□□ 0.53
CDC7O00311 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.39■□□□□ 0.53
CDC7O00311 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC7O00311 REXO1L10P-201ENST00000615707 1290 ntBASIC18.39■□□□□ 0.53
CDC7O00311 REXO1L12P-201ENST00000622156 912 ntBASIC18.39■□□□□ 0.53
CDC7O00311 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 AC096733.2-201ENST00000609937 1394 ntBASIC18.39■□□□□ 0.53
CDC7O00311 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC7O00311 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDC7O00311 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.38■□□□□ 0.53
CDC7O00311 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC7O00311 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC7O00311 AC135050.7-201ENST00000624508 2218 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms