Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA2E9PIF3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA2E9PIF3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA2E9PIF3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPA2E9PIF3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NPIPA2E9PIF3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AC091076.1-201ENST00000610741 619 ntBASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 MYC-208ENST00000641036 567 ntBASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NPIPA2E9PIF3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 AC009947.2-201ENST00000444014 672 ntBASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NPIPA2E9PIF3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPA2E9PIF3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms