Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.71■□□□□ 0.59
CFAP99D6REC4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP99D6REC4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.71■□□□□ 0.58
CFAP99D6REC4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP99D6REC4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 AC090340.1-201ENST00000620778 4980 ntBASIC18.7■□□□□ 0.58
CFAP99D6REC4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP99D6REC4 AL049812.1-201ENST00000432563 2267 ntBASIC18.7■□□□□ 0.58
CFAP99D6REC4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 AC020763.4-201ENST00000623414 4170 ntBASIC18.69■□□□□ 0.58
CFAP99D6REC4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.69■□□□□ 0.58
CFAP99D6REC4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 TSPY17P-201ENST00000450329 467 ntBASIC18.69■□□□□ 0.58
CFAP99D6REC4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 AC116562.4-202ENST00000641738 218 ntBASIC18.69■□□□□ 0.58
CFAP99D6REC4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP99D6REC4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CFAP99D6REC4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 AC128688.1-201ENST00000487626 519 ntBASIC18.68■□□□□ 0.58
CFAP99D6REC4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP99D6REC4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP99D6REC4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms