Protein–RNA interactions for Protein: C9JBD0

KRBOX1, KRAB domain-containing protein 1, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX1C9JBD0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 IRX1P1-201ENST00000438849 1838 ntBASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRBOX1C9JBD0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 AP001094.4-201ENST00000579008 2176 ntBASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 AC133561.4-201ENST00000566112 224 ntBASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 MIR4466-201ENST00000606121 54 ntBASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRBOX1C9JBD0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.27■□□□□ 0.04
KRBOX1C9JBD0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.27■□□□□ 0.03
KRBOX1C9JBD0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KRBOX1C9JBD0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms