Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
A0A1W2PRF3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.43■□□□□ 0.06
A0A1W2PRF3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
A0A1W2PRF3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
A0A1W2PRF3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
A0A1W2PRF3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.43■□□□□ 0.06
A0A1W2PRF3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 AC010331.1-201ENST00000611423 582 ntBASIC15.42■□□□□ 0.06
A0A1W2PRF3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 IRX1P1-201ENST00000438849 1838 ntBASIC15.42■□□□□ 0.06
A0A1W2PRF3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
A0A1W2PRF3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
A0A1W2PRF3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 AC008622.2-201ENST00000617006 1229 ntBASIC15.41■□□□□ 0.06
A0A1W2PRF3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 KRT8P45-201ENST00000414328 1447 ntBASIC15.41■□□□□ 0.06
A0A1W2PRF3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
A0A1W2PRF3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
A0A1W2PRF3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 CA15P1-201ENST00000481698 905 ntBASIC15.4■□□□□ 0.06
A0A1W2PRF3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 AL049597.2-201ENST00000565575 961 ntBASIC15.4■□□□□ 0.06
A0A1W2PRF3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 AC141586.3-201ENST00000562166 1838 ntBASIC15.4■□□□□ 0.06
A0A1W2PRF3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
A0A1W2PRF3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
A0A1W2PRF3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
A0A1W2PRF3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
A0A1W2PRF3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms