Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 MTMR9LP-203ENST00000426597 1545 ntBASIC15.33■□□□□ 0.04
DUXBA0A1W2PPF3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 RCC2P6-201ENST00000526625 1557 ntBASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 AL160286.2-201ENST00000567150 934 ntBASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 AC068587.9-201ENST00000641814 219 ntBASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 LINC00896-202ENST00000609602 2128 ntBASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.32■□□□□ 0.04
DUXBA0A1W2PPF3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 AC138028.4-201ENST00000564984 1845 ntBASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 BX276092.2-201ENST00000417668 665 ntBASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 MIR6821-201ENST00000617625 74 ntBASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 KRT8P45-201ENST00000414328 1447 ntBASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.31■□□□□ 0.04
DUXBA0A1W2PPF3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 AC135776.1-201ENST00000319817 2481 ntBASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 AC134043.2-201ENST00000624206 2238 ntBASIC15.3■□□□□ 0.04
DUXBA0A1W2PPF3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms