Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
IGHV4-28A0A0C4DH34 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 AP000523.1-201ENST00000398242 1049 ntBASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC092647.4-201ENST00000457211 535 ntBASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 CR769767.2-201ENST00000622735 460 ntBASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
IGHV4-28A0A0C4DH34 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC036111.1-201ENST00000533973 1582 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 ARMC10P1-201ENST00000313754 855 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 RNF152P1-201ENST00000397754 604 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 KRT18P35-201ENST00000510488 1269 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 LINC01238-205ENST00000567549 1107 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 AL445228.2-201ENST00000605589 952 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 AL031432.5-201ENST00000641059 760 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 RCC2P3-201ENST00000418112 1537 ntBASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
IGHV4-28A0A0C4DH34 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
IGHV4-28A0A0C4DH34 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms