Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 AC141586.3-201ENST00000562166 1838 ntBASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 KRT18P23-201ENST00000435622 1283 ntBASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 SPDYE13P-201ENST00000445314 798 ntBASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 FP475955.4-201ENST00000623131 1990 ntBASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TBC1D3EA0A087X179 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 KRT18P48-201ENST00000434763 852 ntBASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 AL157888.1-201ENST00000631930 593 ntBASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3EA0A087X179 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 MIR3917-201ENST00000580971 93 ntBASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3EA0A087X179 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
TBC1D3EA0A087X179 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms