Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 AL499627.1-201ENST00000569373 2188 ntBASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 C1QBPP2-201ENST00000528754 825 ntBASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 MIR4651-201ENST00000582622 73 ntBASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV27A0A087WT01 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAV27A0A087WT01 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV27A0A087WT01 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV27A0A087WT01 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV27A0A087WT01 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV27A0A087WT01 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV27A0A087WT01 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 MTMR9LP-203ENST00000426597 1545 ntBASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 AL354751.1-201ENST00000412768 1863 ntBASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.01■□□□□ 0.31
TRAV27A0A087WT01 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17■□□□□ 0.31
TRAV27A0A087WT01 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 AR-207ENST00000612010 3896 ntTSL 5 BASIC17■□□□□ 0.31
TRAV27A0A087WT01 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV27A0A087WT01 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV27A0A087WT01 AC091390.4-202ENST00000476426 537 ntBASIC17■□□□□ 0.31
TRAV27A0A087WT01 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17■□□□□ 0.31
TRAV27A0A087WT01 CD99P1-205ENST00000527459 561 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms