Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAV18A0A075B6X5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.14■□□□□ 0.18
TRAV18A0A075B6X5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV18A0A075B6X5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV18A0A075B6X5 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV18A0A075B6X5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms