Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARFGEF1Q9Y6D6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.53■■■□□ 2.64
ARFGEF1Q9Y6D6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
ARFGEF1Q9Y6D6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARFGEF1Q9Y6D6 DUX4L9-201ENST00000449051 1259 ntBASIC31.5■■■□□ 2.63
ARFGEF1Q9Y6D6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.5■■■□□ 2.63
ARFGEF1Q9Y6D6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ARFGEF1Q9Y6D6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
ARFGEF1Q9Y6D6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ARFGEF1Q9Y6D6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ARFGEF1Q9Y6D6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
ARFGEF1Q9Y6D6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.47■■■□□ 2.63
ARFGEF1Q9Y6D6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.46■■■□□ 2.63
ARFGEF1Q9Y6D6 GUSBP5-201ENST00000418136 578 ntBASIC31.46■■■□□ 2.63
ARFGEF1Q9Y6D6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.46■■■□□ 2.63
ARFGEF1Q9Y6D6 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.45■■■□□ 2.63
ARFGEF1Q9Y6D6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ARFGEF1Q9Y6D6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ARFGEF1Q9Y6D6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.45■■■□□ 2.62
ARFGEF1Q9Y6D6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.45■■■□□ 2.62
ARFGEF1Q9Y6D6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ARFGEF1Q9Y6D6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ARFGEF1Q9Y6D6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARFGEF1Q9Y6D6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARFGEF1Q9Y6D6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.41■■■□□ 2.62
ARFGEF1Q9Y6D6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.4■■■□□ 2.62
ARFGEF1Q9Y6D6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ARFGEF1Q9Y6D6 AC025884.2-201ENST00000553429 711 ntBASIC31.4■■■□□ 2.62
ARFGEF1Q9Y6D6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ARFGEF1Q9Y6D6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
ARFGEF1Q9Y6D6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 THA1P-201ENST00000590384 1145 ntBASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
ARFGEF1Q9Y6D6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ARFGEF1Q9Y6D6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARFGEF1Q9Y6D6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARFGEF1Q9Y6D6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 KRT8P33-201ENST00000508125 1423 ntBASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 SPCS2P3-201ENST00000500401 656 ntBASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.34■■■□□ 2.61
ARFGEF1Q9Y6D6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARFGEF1Q9Y6D6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARFGEF1Q9Y6D6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.32■■■□□ 2.6
ARFGEF1Q9Y6D6 AC010980.1-201ENST00000587192 1142 ntBASIC31.32■■■□□ 2.6
ARFGEF1Q9Y6D6 MIR4508-201ENST00000584178 70 ntBASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 RAP2CP1-202ENST00000605179 643 ntBASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 AC026202.3-201ENST00000600805 1127 ntBASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.3■■■□□ 2.6
ARFGEF1Q9Y6D6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ARFGEF1Q9Y6D6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARFGEF1Q9Y6D6 AC093536.1-201ENST00000569153 554 ntBASIC31.29■■■□□ 2.6
ARFGEF1Q9Y6D6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARFGEF1Q9Y6D6 RP9P-202ENST00000450133 1212 ntBASIC31.28■■■□□ 2.6
ARFGEF1Q9Y6D6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARFGEF1Q9Y6D6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARFGEF1Q9Y6D6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 PVT1_1.1-201ENST00000615125 194 ntBASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms