Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.78■■□□□ 1.88
HCFC2Q9Y5Z7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.77■■□□□ 1.88
HCFC2Q9Y5Z7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.77■■□□□ 1.88
HCFC2Q9Y5Z7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
HCFC2Q9Y5Z7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HCFC2Q9Y5Z7 AC007029.1-201ENST00000604183 313 ntBASIC26.75■■□□□ 1.87
HCFC2Q9Y5Z7 AC129492.7-201ENST00000622992 756 ntBASIC26.74■■□□□ 1.87
HCFC2Q9Y5Z7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
HCFC2Q9Y5Z7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
HCFC2Q9Y5Z7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.73■■□□□ 1.87
HCFC2Q9Y5Z7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HCFC2Q9Y5Z7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.73■■□□□ 1.87
HCFC2Q9Y5Z7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
HCFC2Q9Y5Z7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
HCFC2Q9Y5Z7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.72■■□□□ 1.87
HCFC2Q9Y5Z7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
HCFC2Q9Y5Z7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.71■■□□□ 1.87
HCFC2Q9Y5Z7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
HCFC2Q9Y5Z7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
HCFC2Q9Y5Z7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
HCFC2Q9Y5Z7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
HCFC2Q9Y5Z7 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.7■■□□□ 1.87
HCFC2Q9Y5Z7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
HCFC2Q9Y5Z7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
HCFC2Q9Y5Z7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.7■■□□□ 1.86
HCFC2Q9Y5Z7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HCFC2Q9Y5Z7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
HCFC2Q9Y5Z7 AL592293.1-201ENST00000502889 1188 ntBASIC26.69■■□□□ 1.86
HCFC2Q9Y5Z7 AC009831.1-201ENST00000580420 1582 ntBASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
HCFC2Q9Y5Z7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HCFC2Q9Y5Z7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HCFC2Q9Y5Z7 AC133552.2-201ENST00000619106 1032 ntBASIC26.67■■□□□ 1.86
HCFC2Q9Y5Z7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HCFC2Q9Y5Z7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
HCFC2Q9Y5Z7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 DUX4L18-201ENST00000553347 1267 ntBASIC26.66■■□□□ 1.86
HCFC2Q9Y5Z7 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.65■■□□□ 1.86
HCFC2Q9Y5Z7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
HCFC2Q9Y5Z7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
HCFC2Q9Y5Z7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.63■■□□□ 1.85
HCFC2Q9Y5Z7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
HCFC2Q9Y5Z7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
HCFC2Q9Y5Z7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HCFC2Q9Y5Z7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.62■■□□□ 1.85
HCFC2Q9Y5Z7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HCFC2Q9Y5Z7 SMPD5-203ENST00000639008 1464 ntBASIC26.62■■□□□ 1.85
HCFC2Q9Y5Z7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
HCFC2Q9Y5Z7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HCFC2Q9Y5Z7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HCFC2Q9Y5Z7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HCFC2Q9Y5Z7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.61■■□□□ 1.85
HCFC2Q9Y5Z7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HCFC2Q9Y5Z7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.6■■□□□ 1.85
HCFC2Q9Y5Z7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HCFC2Q9Y5Z7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
HCFC2Q9Y5Z7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
HCFC2Q9Y5Z7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HCFC2Q9Y5Z7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HCFC2Q9Y5Z7 AP004833.2-201ENST00000532228 1454 ntBASIC26.59■■□□□ 1.85
HCFC2Q9Y5Z7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
HCFC2Q9Y5Z7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
HCFC2Q9Y5Z7 AL359258.2-201ENST00000564063 1566 ntBASIC26.58■■□□□ 1.85
HCFC2Q9Y5Z7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
HCFC2Q9Y5Z7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
HCFC2Q9Y5Z7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.58■■□□□ 1.85
HCFC2Q9Y5Z7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 AC100797.4-201ENST00000631653 1827 ntBASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
HCFC2Q9Y5Z7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
HCFC2Q9Y5Z7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
HCFC2Q9Y5Z7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.56■■□□□ 1.84
HCFC2Q9Y5Z7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.56■■□□□ 1.84
HCFC2Q9Y5Z7 AC026202.3-201ENST00000600805 1127 ntBASIC26.56■■□□□ 1.84
HCFC2Q9Y5Z7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HCFC2Q9Y5Z7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
HCFC2Q9Y5Z7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
HCFC2Q9Y5Z7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.55■■□□□ 1.84
HCFC2Q9Y5Z7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
HCFC2Q9Y5Z7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HCFC2Q9Y5Z7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.53■■□□□ 1.84
HCFC2Q9Y5Z7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms