Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.61■■■□□ 2.01
PCDHA11Q9Y5I1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PCDHA11Q9Y5I1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHA11Q9Y5I1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHA11Q9Y5I1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PCDHA11Q9Y5I1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHA11Q9Y5I1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.58■■■□□ 2.01
PCDHA11Q9Y5I1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.58■■■□□ 2.01
PCDHA11Q9Y5I1 AL451085.2-201ENST00000605085 799 ntBASIC27.58■■■□□ 2.01
PCDHA11Q9Y5I1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PCDHA11Q9Y5I1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 DUX4L18-201ENST00000553347 1267 ntBASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
PCDHA11Q9Y5I1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.56■■■□□ 2
PCDHA11Q9Y5I1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA11Q9Y5I1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.55■■■□□ 2
PCDHA11Q9Y5I1 AC007029.1-201ENST00000604183 313 ntBASIC27.55■■■□□ 2
PCDHA11Q9Y5I1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA11Q9Y5I1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
PCDHA11Q9Y5I1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
PCDHA11Q9Y5I1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHA11Q9Y5I1 AL592295.1-201ENST00000400984 884 ntBASIC27.54■■■□□ 2
PCDHA11Q9Y5I1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 AL592293.1-201ENST00000502889 1188 ntBASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 AL157400.5-201ENST00000507624 621 ntBASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.53■■■□□ 2
PCDHA11Q9Y5I1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.52■■■□□ 2
PCDHA11Q9Y5I1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.52■■■□□ 2
PCDHA11Q9Y5I1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
PCDHA11Q9Y5I1 AC133552.2-201ENST00000619106 1032 ntBASIC27.51■■□□□ 1.99
PCDHA11Q9Y5I1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.51■■□□□ 1.99
PCDHA11Q9Y5I1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PCDHA11Q9Y5I1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
PCDHA11Q9Y5I1 AC019069.1-201ENST00000610008 1333 ntBASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 AC009831.1-201ENST00000580420 1582 ntBASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.49■■□□□ 1.99
PCDHA11Q9Y5I1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 ABCB10P1-201ENST00000614297 2181 ntBASIC27.48■■□□□ 1.99
PCDHA11Q9Y5I1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHA11Q9Y5I1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCDHA11Q9Y5I1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHA11Q9Y5I1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHA11Q9Y5I1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
PCDHA11Q9Y5I1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.45■■□□□ 1.98
PCDHA11Q9Y5I1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA11Q9Y5I1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.44■■□□□ 1.98
PCDHA11Q9Y5I1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA11Q9Y5I1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCDHA11Q9Y5I1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA11Q9Y5I1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
PCDHA11Q9Y5I1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHA11Q9Y5I1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHA11Q9Y5I1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.4■■□□□ 1.98
PCDHA11Q9Y5I1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.38■■□□□ 1.97
PCDHA11Q9Y5I1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHA11Q9Y5I1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHA11Q9Y5I1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA11Q9Y5I1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHA11Q9Y5I1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.37■■□□□ 1.97
PCDHA11Q9Y5I1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
PCDHA11Q9Y5I1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.37■■□□□ 1.97
PCDHA11Q9Y5I1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA11Q9Y5I1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA11Q9Y5I1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA11Q9Y5I1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHA11Q9Y5I1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.36■■□□□ 1.97
PCDHA11Q9Y5I1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHA11Q9Y5I1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms