Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHA13Q9Y5I0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
PCDHA13Q9Y5I0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA13Q9Y5I0 AC091060.1-201ENST00000623524 1766 ntBASIC26.91■■□□□ 1.9
PCDHA13Q9Y5I0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.9■■□□□ 1.9
PCDHA13Q9Y5I0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA13Q9Y5I0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PCDHA13Q9Y5I0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.9■■□□□ 1.9
PCDHA13Q9Y5I0 AC108673.1-201ENST00000510422 1159 ntBASIC26.89■■□□□ 1.9
PCDHA13Q9Y5I0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
PCDHA13Q9Y5I0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA13Q9Y5I0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
PCDHA13Q9Y5I0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA13Q9Y5I0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA13Q9Y5I0 MIR6090-201ENST00000622481 60 ntBASIC26.88■■□□□ 1.89
PCDHA13Q9Y5I0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.88■■□□□ 1.89
PCDHA13Q9Y5I0 AC135731.1-201ENST00000569415 2548 ntBASIC26.87■■□□□ 1.89
PCDHA13Q9Y5I0 SUZ12P1-203ENST00000578195 985 ntBASIC26.87■■□□□ 1.89
PCDHA13Q9Y5I0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHA13Q9Y5I0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
PCDHA13Q9Y5I0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA13Q9Y5I0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
PCDHA13Q9Y5I0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA13Q9Y5I0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA13Q9Y5I0 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.86■■□□□ 1.89
PCDHA13Q9Y5I0 LINC00273-201ENST00000539813 1452 ntBASIC26.86■■□□□ 1.89
PCDHA13Q9Y5I0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA13Q9Y5I0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
PCDHA13Q9Y5I0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
PCDHA13Q9Y5I0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA13Q9Y5I0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHA13Q9Y5I0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.83■■□□□ 1.89
PCDHA13Q9Y5I0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PCDHA13Q9Y5I0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PCDHA13Q9Y5I0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
PCDHA13Q9Y5I0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
PCDHA13Q9Y5I0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA13Q9Y5I0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.82■■□□□ 1.88
PCDHA13Q9Y5I0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA13Q9Y5I0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA13Q9Y5I0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA13Q9Y5I0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA13Q9Y5I0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA13Q9Y5I0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA13Q9Y5I0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA13Q9Y5I0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.8■■□□□ 1.88
PCDHA13Q9Y5I0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA13Q9Y5I0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA13Q9Y5I0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA13Q9Y5I0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHA13Q9Y5I0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA13Q9Y5I0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA13Q9Y5I0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA13Q9Y5I0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHA13Q9Y5I0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA13Q9Y5I0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.88
PCDHA13Q9Y5I0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
PCDHA13Q9Y5I0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA13Q9Y5I0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA13Q9Y5I0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHA13Q9Y5I0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHA13Q9Y5I0 DUX4L28-201ENST00000623687 678 ntBASIC26.75■■□□□ 1.87
PCDHA13Q9Y5I0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA13Q9Y5I0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA13Q9Y5I0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHA13Q9Y5I0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDHA13Q9Y5I0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.74■■□□□ 1.87
PCDHA13Q9Y5I0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA13Q9Y5I0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHA13Q9Y5I0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHA13Q9Y5I0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA13Q9Y5I0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHA13Q9Y5I0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 AC145676.1-201ENST00000514988 2004 ntBASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC26.72■■□□□ 1.87
PCDHA13Q9Y5I0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA13Q9Y5I0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHA13Q9Y5I0 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHA13Q9Y5I0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
PCDHA13Q9Y5I0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
PCDHA13Q9Y5I0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHA13Q9Y5I0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDHA13Q9Y5I0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDHA13Q9Y5I0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDHA13Q9Y5I0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHA13Q9Y5I0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHA13Q9Y5I0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHA13Q9Y5I0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHA13Q9Y5I0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHA13Q9Y5I0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.65■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms