Protein–RNA interactions for Protein: Q9Y221

NIP7, 60S ribosome subunit biogenesis protein NIP7 homolog, humanhuman

Known RBP eCLIP

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7Q9Y221 TAF1D-202ENST00000393259 547 ntTSL 33.42□□□□□ -1.862e-50■■□□□ 13
NIP7Q9Y221 TAF1D-218ENST00000533794 505 ntTSL 23□□□□□ -1.932e-50■■□□□ 13
NIP7Q9Y221 TAF1D-221ENST00000540232 483 ntTSL 32.62□□□□□ -1.992e-50■■□□□ 13
NIP7Q9Y221 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.58■■□□□ 1.22e-7■■□□□ 13
NIP7Q9Y221 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.57■□□□□ 0.562e-7■■□□□ 13
NIP7Q9Y221 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.03■□□□□ 0.482e-7■■□□□ 13
NIP7Q9Y221 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.82■□□□□ 0.442e-7■■□□□ 13
NIP7Q9Y221 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.32■□□□□ 0.362e-7■■□□□ 13
NIP7Q9Y221 GSN-213ENST00000483960 802 ntTSL 314.47□□□□□ -0.092e-7■■□□□ 13
NIP7Q9Y221 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.122e-7■■□□□ 13
NIP7Q9Y221 snoU2-30.1-201ENST00000365012 70 ntBASIC1.09□□□□□ -2.235e-7■■□□□ 13
NIP7Q9Y221 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.922e-14■■□□□ 13
NIP7Q9Y221 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 59.01□□□□□ -0.972e-33■■□□□ 12.9
NIP7Q9Y221 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.982e-33■■□□□ 12.9
NIP7Q9Y221 RPL17-219ENST00000584364 523 ntTSL 25.52□□□□□ -1.532e-33■■□□□ 12.9
NIP7Q9Y221 RPL17-214ENST00000582588 401 ntTSL 22.65□□□□□ -1.992e-33■■□□□ 12.9
NIP7Q9Y221 SNORD58C-201ENST00000365223 64 ntBASIC0.11□□□□□ -2.392e-33■■□□□ 12.9
NIP7Q9Y221 GAS5-229ENST00000458220 469 ntTSL 23.74□□□□□ -1.812e-37■■□□□ 12.8
NIP7Q9Y221 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.343e-6■■□□□ 12.7
NIP7Q9Y221 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.749e-15■■□□□ 12.7
NIP7Q9Y221 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.37e-60■■□□□ 12.7
NIP7Q9Y221 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.577e-60■■□□□ 12.7
NIP7Q9Y221 SCARNA6-201ENST00000515982 265 ntBASIC8.93□□□□□ -0.981e-15■■□□□ 12.6
NIP7Q9Y221 C2-217ENST00000497706 1609 ntTSL 519.61■□□□□ 0.732e-7■■□□□ 12.5
NIP7Q9Y221 C2-213ENST00000484636 542 ntTSL 419.43■□□□□ 0.72e-7■■□□□ 12.5
NIP7Q9Y221 C2-203ENST00000411571 773 ntTSL 518.07■□□□□ 0.482e-7■■□□□ 12.5
NIP7Q9Y221 C2-202ENST00000383177 1847 ntTSL 517.42■□□□□ 0.382e-7■■□□□ 12.5
NIP7Q9Y221 C2-211ENST00000469372 1906 ntTSL 2 BASIC15.74■□□□□ 0.112e-7■■□□□ 12.5
NIP7Q9Y221 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.63■□□□□ 0.092e-7■■□□□ 12.5
NIP7Q9Y221 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.54□□□□□ -0.082e-7■■□□□ 12.5
NIP7Q9Y221 C2-212ENST00000482060 2335 ntTSL 213.39□□□□□ -0.272e-7■■□□□ 12.5
NIP7Q9Y221 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.792e-7■■□□□ 12.5
NIP7Q9Y221 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.03■■■□□ 2.563e-30■■□□□ 12.5
NIP7Q9Y221 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.153e-30■■□□□ 12.5
NIP7Q9Y221 PPAN-205ENST00000446223 844 ntTSL 323.87■■□□□ 1.413e-30■■□□□ 12.5
NIP7Q9Y221 PPAN-206ENST00000466025 523 ntTSL 223.29■■□□□ 1.323e-30■■□□□ 12.5
NIP7Q9Y221 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.993e-30■■□□□ 12.5
NIP7Q9Y221 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.67■□□□□ 0.743e-30■■□□□ 12.5
NIP7Q9Y221 SNORD105B-201ENST00000458770 79 ntBASIC4.69□□□□□ -1.663e-30■■□□□ 12.5
NIP7Q9Y221 SERPINF1-206ENST00000571870 739 ntTSL 220.03■□□□□ 0.81e-6■■□□□ 12.3
NIP7Q9Y221 SERPINF1-210ENST00000573770 789 ntTSL 315.78■□□□□ 0.121e-6■■□□□ 12.3
NIP7Q9Y221 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.535e-6■■□□□ 12.2
NIP7Q9Y221 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.535e-6■■□□□ 12.2
NIP7Q9Y221 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.535e-6■■□□□ 12.2
NIP7Q9Y221 FN1-223ENST00000490833 699 ntTSL 37.33□□□□□ -1.241e-41■■□□□ 12.2
NIP7Q9Y221 PID1-206ENST00000534952 553 ntTSL 417.97■□□□□ 0.478e-20■■□□□ 12.2
NIP7Q9Y221 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.038e-20■■□□□ 12.2
NIP7Q9Y221 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.73□□□□□ -0.058e-20■■□□□ 12.2
NIP7Q9Y221 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC13.84□□□□□ -0.198e-20■■□□□ 12.2
NIP7Q9Y221 PID1-201ENST00000354069 839 ntTSL 3 BASIC10.65□□□□□ -0.78e-20■■□□□ 12.2
NIP7Q9Y221 PID1-205ENST00000482518 479 ntTSL 25.65□□□□□ -1.58e-20■■□□□ 12.2
NIP7Q9Y221 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.772e-6■■□□□ 12.1
NIP7Q9Y221 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.152e-6■■□□□ 12.1
NIP7Q9Y221 CLU-209ENST00000522098 850 ntTSL 213.53□□□□□ -0.242e-6■■□□□ 12.1
NIP7Q9Y221 CLU-211ENST00000522299 2807 ntTSL 213.05□□□□□ -0.322e-6■■□□□ 12.1
NIP7Q9Y221 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.392e-6■■□□□ 12.1
NIP7Q9Y221 CLU-208ENST00000521770 520 ntTSL 210.18□□□□□ -0.782e-6■■□□□ 12.1
NIP7Q9Y221 ATP5B-203ENST00000547808 705 ntTSL 525.05■■□□□ 1.64e-23■■□□□ 12.1
NIP7Q9Y221 ATP5B-210ENST00000552959 1085 ntTSL 324.97■■□□□ 1.594e-23■■□□□ 12.1
NIP7Q9Y221 ATP5B-211ENST00000553007 814 ntTSL 524.52■■□□□ 1.524e-23■■□□□ 12.1
NIP7Q9Y221 ATP5B-207ENST00000551020 856 ntTSL 324.52■■□□□ 1.524e-23■■□□□ 12.1
NIP7Q9Y221 ATP5B-205ENST00000548647 682 ntTSL 520.86■□□□□ 0.934e-23■■□□□ 12.1
NIP7Q9Y221 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.914e-23■■□□□ 12.1
NIP7Q9Y221 ATP5B-204ENST00000548474 449 ntTSL 38.07□□□□□ -1.124e-23■■□□□ 12.1
NIP7Q9Y221 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-8■■□□□ 12
NIP7Q9Y221 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.89■□□□□ 0.291e-8■■□□□ 12
NIP7Q9Y221 FN1-214ENST00000460217 804 ntTSL 213.51□□□□□ -0.257e-65■■□□□ 11.9
NIP7Q9Y221 FN1-210ENST00000438981 723 ntTSL 210.43□□□□□ -0.747e-65■■□□□ 11.9
NIP7Q9Y221 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.541e-6■■□□□ 11.9
NIP7Q9Y221 SERPINF1-211ENST00000576406 795 ntTSL 315.53■□□□□ 0.081e-6■■□□□ 11.9
NIP7Q9Y221 AP1G1-215ENST00000568327 1724 ntTSL 523.36■■□□□ 1.336e-41■■□□□ 11.9
NIP7Q9Y221 AP1G1-208ENST00000565009 2494 ntTSL 516.04■□□□□ 0.166e-41■■□□□ 11.9
NIP7Q9Y221 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.146e-41■■□□□ 11.9
NIP7Q9Y221 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.556e-41■■□□□ 11.9
NIP7Q9Y221 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.056e-41■■□□□ 11.9
NIP7Q9Y221 AP1G1-211ENST00000565642 2794 ntTSL 57.31□□□□□ -1.246e-41■■□□□ 11.9
NIP7Q9Y221 AP1G1-213ENST00000566179 562 ntTSL 52.25□□□□□ -2.056e-41■■□□□ 11.9
NIP7Q9Y221 SNORD71-201ENST00000411292 86 ntBASIC0.31□□□□□ -2.366e-41■■□□□ 11.9
NIP7Q9Y221 FN1-222ENST00000485567 584 ntTSL 1 (best)3.41□□□□□ -1.862e-56■■□□□ 11.9
NIP7Q9Y221 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.65■■■□□ 2.181e-6■■□□□ 11.8
NIP7Q9Y221 P4HB-216ENST00000571617 505 ntTSL 327.44■■□□□ 1.985e-11■■□□□ 11.8
NIP7Q9Y221 P4HB-223ENST00000576390 439 ntTSL 4 BASIC25.08■■□□□ 1.615e-11■■□□□ 11.8
NIP7Q9Y221 HPN-207ENST00000599363 1828 ntTSL 525.02■■□□□ 1.61e-6■■□□□ 11.8
NIP7Q9Y221 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.4■■□□□ 1.55e-11■■□□□ 11.8
NIP7Q9Y221 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.435e-11■■□□□ 11.8
NIP7Q9Y221 GRN-205ENST00000586443 1557 ntTSL 323.08■■□□□ 1.291e-6■■□□□ 11.8
NIP7Q9Y221 HPN-204ENST00000593305 2175 ntTSL 222.25■■□□□ 1.151e-6■■□□□ 11.8
NIP7Q9Y221 HPN-203ENST00000541345 1820 ntTSL 221.72■■□□□ 1.071e-6■■□□□ 11.8
NIP7Q9Y221 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.921e-6■■□□□ 11.8
NIP7Q9Y221 P4HB-202ENST00000415593 1669 ntTSL 1 (best)20.67■□□□□ 0.95e-11■■□□□ 11.8
NIP7Q9Y221 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.13■□□□□ 0.811e-6■■□□□ 11.8
NIP7Q9Y221 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.751e-6■■□□□ 11.8
NIP7Q9Y221 GRN-204ENST00000586242 665 ntTSL 319.63■□□□□ 0.731e-6■■□□□ 11.8
NIP7Q9Y221 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.44■□□□□ 0.71e-6■■□□□ 11.8
NIP7Q9Y221 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.52■□□□□ 0.561e-6■■□□□ 11.8
NIP7Q9Y221 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.551e-6■■□□□ 11.8
NIP7Q9Y221 P4HB-220ENST00000575069 2453 ntTSL 218.39■□□□□ 0.535e-11■■□□□ 11.8
NIP7Q9Y221 P4HB-209ENST00000474712 390 ntTSL 216.81■□□□□ 0.285e-11■■□□□ 11.8
NIP7Q9Y221 P4HB-210ENST00000476482 765 ntTSL 1 (best)16.12■□□□□ 0.175e-11■■□□□ 11.8
NIP7Q9Y221 RPS21-205ENST00000492356 429 ntTSL 1 (best)15.99■□□□□ 0.151e-12■■□□□ 11.8
Retrieved 100 of 1,619 protein–RNA pairs in 17.8 ms