Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
MRPL47Q9HD33 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
MRPL47Q9HD33 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
MRPL47Q9HD33 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC26.52■■□□□ 1.84
MRPL47Q9HD33 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
MRPL47Q9HD33 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
MRPL47Q9HD33 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
MRPL47Q9HD33 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
MRPL47Q9HD33 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
MRPL47Q9HD33 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
MRPL47Q9HD33 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
MRPL47Q9HD33 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
MRPL47Q9HD33 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
MRPL47Q9HD33 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
MRPL47Q9HD33 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
MRPL47Q9HD33 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
MRPL47Q9HD33 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.48■■□□□ 1.83
MRPL47Q9HD33 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
MRPL47Q9HD33 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.48■■□□□ 1.83
MRPL47Q9HD33 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.48■■□□□ 1.83
MRPL47Q9HD33 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
MRPL47Q9HD33 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
MRPL47Q9HD33 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
MRPL47Q9HD33 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
MRPL47Q9HD33 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
MRPL47Q9HD33 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
MRPL47Q9HD33 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
MRPL47Q9HD33 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.45■■□□□ 1.82
MRPL47Q9HD33 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
MRPL47Q9HD33 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.44■■□□□ 1.82
MRPL47Q9HD33 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
MRPL47Q9HD33 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
MRPL47Q9HD33 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
MRPL47Q9HD33 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.43■■□□□ 1.82
MRPL47Q9HD33 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
MRPL47Q9HD33 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
MRPL47Q9HD33 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.42■■□□□ 1.82
MRPL47Q9HD33 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
MRPL47Q9HD33 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.41■■□□□ 1.82
MRPL47Q9HD33 LINC01971-201ENST00000617888 1048 ntBASIC26.4■■□□□ 1.82
MRPL47Q9HD33 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
MRPL47Q9HD33 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.39■■□□□ 1.82
MRPL47Q9HD33 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
MRPL47Q9HD33 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
MRPL47Q9HD33 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
MRPL47Q9HD33 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
MRPL47Q9HD33 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
MRPL47Q9HD33 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MRPL47Q9HD33 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.37■■□□□ 1.81
MRPL47Q9HD33 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
MRPL47Q9HD33 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
MRPL47Q9HD33 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MRPL47Q9HD33 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
MRPL47Q9HD33 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.35■■□□□ 1.81
MRPL47Q9HD33 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
MRPL47Q9HD33 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.34■■□□□ 1.81
MRPL47Q9HD33 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.34■■□□□ 1.81
MRPL47Q9HD33 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.34■■□□□ 1.81
MRPL47Q9HD33 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.34■■□□□ 1.81
MRPL47Q9HD33 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
MRPL47Q9HD33 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.34■■□□□ 1.81
MRPL47Q9HD33 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MRPL47Q9HD33 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.33■■□□□ 1.81
MRPL47Q9HD33 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
MRPL47Q9HD33 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.32■■□□□ 1.8
MRPL47Q9HD33 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
MRPL47Q9HD33 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
MRPL47Q9HD33 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
MRPL47Q9HD33 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
MRPL47Q9HD33 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
MRPL47Q9HD33 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms