Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
VPS16Q9H269 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
VPS16Q9H269 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
VPS16Q9H269 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.61■■■□□ 2.01
VPS16Q9H269 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.61■■■□□ 2.01
VPS16Q9H269 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.61■■■□□ 2.01
VPS16Q9H269 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
VPS16Q9H269 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
VPS16Q9H269 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
VPS16Q9H269 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
VPS16Q9H269 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.58■■■□□ 2
VPS16Q9H269 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
VPS16Q9H269 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
VPS16Q9H269 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
VPS16Q9H269 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
VPS16Q9H269 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
VPS16Q9H269 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
VPS16Q9H269 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
VPS16Q9H269 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
VPS16Q9H269 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.55■■■□□ 2
VPS16Q9H269 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.55■■■□□ 2
VPS16Q9H269 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
VPS16Q9H269 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.54■■■□□ 2
VPS16Q9H269 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.54■■■□□ 2
VPS16Q9H269 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.54■■■□□ 2
VPS16Q9H269 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
VPS16Q9H269 CIB2-204ENST00000557846 934 ntTSL 3 BASIC27.53■■■□□ 2
VPS16Q9H269 AP006261.1-201ENST00000584783 668 ntBASIC27.53■■■□□ 2
VPS16Q9H269 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.53■■■□□ 2
VPS16Q9H269 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.53■■■□□ 2
VPS16Q9H269 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
VPS16Q9H269 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.52■■■□□ 2
VPS16Q9H269 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.52■■■□□ 2
VPS16Q9H269 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.52■■■□□ 2
VPS16Q9H269 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
VPS16Q9H269 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.52■■■□□ 2
VPS16Q9H269 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.52■■■□□ 2
VPS16Q9H269 AC087741.3-201ENST00000624270 1347 ntBASIC27.51■■□□□ 1.99
VPS16Q9H269 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.51■■□□□ 1.99
VPS16Q9H269 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.51■■□□□ 1.99
VPS16Q9H269 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
VPS16Q9H269 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
VPS16Q9H269 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
VPS16Q9H269 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
VPS16Q9H269 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
VPS16Q9H269 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
VPS16Q9H269 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
VPS16Q9H269 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
VPS16Q9H269 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.48■■□□□ 1.99
VPS16Q9H269 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.48■■□□□ 1.99
VPS16Q9H269 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.48■■□□□ 1.99
VPS16Q9H269 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
VPS16Q9H269 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
VPS16Q9H269 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
VPS16Q9H269 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
VPS16Q9H269 AL449106.1-201ENST00000608517 1980 ntBASIC27.46■■□□□ 1.99
VPS16Q9H269 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.45■■□□□ 1.99
VPS16Q9H269 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
VPS16Q9H269 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC27.44■■□□□ 1.98
VPS16Q9H269 AL162393.1-201ENST00000437852 946 ntBASIC27.44■■□□□ 1.98
VPS16Q9H269 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
VPS16Q9H269 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
VPS16Q9H269 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS16Q9H269 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS16Q9H269 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.43■■□□□ 1.98
VPS16Q9H269 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
VPS16Q9H269 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.43■■□□□ 1.98
VPS16Q9H269 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.43■■□□□ 1.98
VPS16Q9H269 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
VPS16Q9H269 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS16Q9H269 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
VPS16Q9H269 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
VPS16Q9H269 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
VPS16Q9H269 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.42■■□□□ 1.98
VPS16Q9H269 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
VPS16Q9H269 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.41■■□□□ 1.98
VPS16Q9H269 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
VPS16Q9H269 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
VPS16Q9H269 AC091060.1-201ENST00000623524 1766 ntBASIC27.4■■□□□ 1.98
VPS16Q9H269 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
VPS16Q9H269 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
VPS16Q9H269 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
VPS16Q9H269 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
VPS16Q9H269 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC27.39■■□□□ 1.98
VPS16Q9H269 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
VPS16Q9H269 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
VPS16Q9H269 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
VPS16Q9H269 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.38■■□□□ 1.97
VPS16Q9H269 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
VPS16Q9H269 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.37■■□□□ 1.97
VPS16Q9H269 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.37■■□□□ 1.97
VPS16Q9H269 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
VPS16Q9H269 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.36■■□□□ 1.97
VPS16Q9H269 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.35■■□□□ 1.97
VPS16Q9H269 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
VPS16Q9H269 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.35■■□□□ 1.97
VPS16Q9H269 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.35■■□□□ 1.97
VPS16Q9H269 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
VPS16Q9H269 AC044849.2-201ENST00000606596 710 ntBASIC27.35■■□□□ 1.97
VPS16Q9H269 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms