Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COMMD4Q9H0A8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COMMD4Q9H0A8 AC135983.2-203ENST00000454486 1613 ntBASIC22.06■■□□□ 1.12
COMMD4Q9H0A8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COMMD4Q9H0A8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.06■■□□□ 1.12
COMMD4Q9H0A8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COMMD4Q9H0A8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.06■■□□□ 1.12
COMMD4Q9H0A8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COMMD4Q9H0A8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 AL449106.1-201ENST00000608517 1980 ntBASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COMMD4Q9H0A8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.03■■□□□ 1.12
COMMD4Q9H0A8 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.03■■□□□ 1.12
COMMD4Q9H0A8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COMMD4Q9H0A8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
COMMD4Q9H0A8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COMMD4Q9H0A8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COMMD4Q9H0A8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.02■■□□□ 1.12
COMMD4Q9H0A8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
COMMD4Q9H0A8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 AC005559.1-201ENST00000589661 871 ntBASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COMMD4Q9H0A8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
COMMD4Q9H0A8 AC108673.1-201ENST00000510422 1159 ntBASIC22■■□□□ 1.11
COMMD4Q9H0A8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22■■□□□ 1.11
COMMD4Q9H0A8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COMMD4Q9H0A8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22■■□□□ 1.11
COMMD4Q9H0A8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
COMMD4Q9H0A8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
COMMD4Q9H0A8 WHAMMP2-203ENST00000563942 1603 ntBASIC21.99■■□□□ 1.11
COMMD4Q9H0A8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.99■■□□□ 1.11
COMMD4Q9H0A8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COMMD4Q9H0A8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COMMD4Q9H0A8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
COMMD4Q9H0A8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.98■■□□□ 1.11
COMMD4Q9H0A8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.98■■□□□ 1.11
COMMD4Q9H0A8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.98■■□□□ 1.11
COMMD4Q9H0A8 AC091060.1-201ENST00000623524 1766 ntBASIC21.97■■□□□ 1.11
COMMD4Q9H0A8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COMMD4Q9H0A8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
COMMD4Q9H0A8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COMMD4Q9H0A8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COMMD4Q9H0A8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
COMMD4Q9H0A8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COMMD4Q9H0A8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.96■■□□□ 1.11
COMMD4Q9H0A8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COMMD4Q9H0A8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COMMD4Q9H0A8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
COMMD4Q9H0A8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COMMD4Q9H0A8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 SUZ12P1-203ENST00000578195 985 ntBASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 LINC00273-201ENST00000539813 1452 ntBASIC21.94■■□□□ 1.1
COMMD4Q9H0A8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
COMMD4Q9H0A8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COMMD4Q9H0A8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COMMD4Q9H0A8 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.93■■□□□ 1.1
COMMD4Q9H0A8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.92■■□□□ 1.1
COMMD4Q9H0A8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COMMD4Q9H0A8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COMMD4Q9H0A8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COMMD4Q9H0A8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
COMMD4Q9H0A8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.91■■□□□ 1.1
COMMD4Q9H0A8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COMMD4Q9H0A8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 AC135731.1-201ENST00000569415 2548 ntBASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 AC145676.1-201ENST00000514988 2004 ntBASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COMMD4Q9H0A8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
COMMD4Q9H0A8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
COMMD4Q9H0A8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
COMMD4Q9H0A8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms