Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCL19Q99731 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CCL19Q99731 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.49■■□□□ 1.03
CCL19Q99731 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCL19Q99731 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCL19Q99731 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
CCL19Q99731 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.49■■□□□ 1.03
CCL19Q99731 AC007029.1-201ENST00000604183 313 ntBASIC21.49■■□□□ 1.03
CCL19Q99731 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL19Q99731 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL19Q99731 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.48■■□□□ 1.03
CCL19Q99731 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCL19Q99731 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.48■■□□□ 1.03
CCL19Q99731 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.48■■□□□ 1.03
CCL19Q99731 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.48■■□□□ 1.03
CCL19Q99731 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.48■■□□□ 1.03
CCL19Q99731 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCL19Q99731 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCL19Q99731 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCL19Q99731 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCL19Q99731 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCL19Q99731 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCL19Q99731 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.46■■□□□ 1.03
CCL19Q99731 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCL19Q99731 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCL19Q99731 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.45■■□□□ 1.02
CCL19Q99731 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCL19Q99731 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCL19Q99731 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.44■■□□□ 1.02
CCL19Q99731 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.44■■□□□ 1.02
CCL19Q99731 AC129492.7-201ENST00000622992 756 ntBASIC21.44■■□□□ 1.02
CCL19Q99731 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCL19Q99731 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCL19Q99731 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCL19Q99731 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.43■■□□□ 1.02
CCL19Q99731 AC133552.2-201ENST00000619106 1032 ntBASIC21.43■■□□□ 1.02
CCL19Q99731 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCL19Q99731 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCL19Q99731 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.42■■□□□ 1.02
CCL19Q99731 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCL19Q99731 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCL19Q99731 DUX4L18-201ENST00000553347 1267 ntBASIC21.42■■□□□ 1.02
CCL19Q99731 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CCL19Q99731 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCL19Q99731 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCL19Q99731 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCL19Q99731 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCL19Q99731 AL592293.1-201ENST00000502889 1188 ntBASIC21.41■■□□□ 1.02
CCL19Q99731 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCL19Q99731 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCL19Q99731 AC009831.1-201ENST00000580420 1582 ntBASIC21.4■■□□□ 1.02
CCL19Q99731 SMPD5-203ENST00000639008 1464 ntBASIC21.4■■□□□ 1.02
CCL19Q99731 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.4■■□□□ 1.02
CCL19Q99731 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCL19Q99731 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCL19Q99731 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.4■■□□□ 1.02
CCL19Q99731 AL359258.2-201ENST00000564063 1566 ntBASIC21.4■■□□□ 1.02
CCL19Q99731 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCL19Q99731 AP004833.2-201ENST00000532228 1454 ntBASIC21.39■■□□□ 1.02
CCL19Q99731 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCL19Q99731 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
CCL19Q99731 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.39■■□□□ 1.01
CCL19Q99731 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCL19Q99731 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCL19Q99731 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CCL19Q99731 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCL19Q99731 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.38■■□□□ 1.01
CCL19Q99731 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.38■■□□□ 1.01
CCL19Q99731 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.38■■□□□ 1.01
CCL19Q99731 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.38■■□□□ 1.01
CCL19Q99731 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCL19Q99731 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCL19Q99731 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCL19Q99731 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCL19Q99731 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCL19Q99731 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCL19Q99731 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.36■■□□□ 1.01
CCL19Q99731 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCL19Q99731 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
CCL19Q99731 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCL19Q99731 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCL19Q99731 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCL19Q99731 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCL19Q99731 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCL19Q99731 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.35■■□□□ 1.01
CCL19Q99731 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CCL19Q99731 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.35■■□□□ 1.01
CCL19Q99731 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCL19Q99731 AC100797.4-201ENST00000631653 1827 ntBASIC21.34■■□□□ 1.01
CCL19Q99731 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCL19Q99731 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL19Q99731 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL19Q99731 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CCL19Q99731 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL19Q99731 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL19Q99731 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL19Q99731 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.33■■□□□ 1.01
CCL19Q99731 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCL19Q99731 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.33■■□□□ 1
CCL19Q99731 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms