Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
DUX3Q96PT4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.51■□□□□ 0.71
DUX3Q96PT4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
DUX3Q96PT4 RARRES2P2-201ENST00000394842 485 ntBASIC19.51■□□□□ 0.71
DUX3Q96PT4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.51■□□□□ 0.71
DUX3Q96PT4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUX3Q96PT4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DUX3Q96PT4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
DUX3Q96PT4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DUX3Q96PT4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DUX3Q96PT4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.5■□□□□ 0.71
DUX3Q96PT4 AC139426.1-201ENST00000568218 2529 ntBASIC19.5■□□□□ 0.71
DUX3Q96PT4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DUX3Q96PT4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.49■□□□□ 0.71
DUX3Q96PT4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.49■□□□□ 0.71
DUX3Q96PT4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.49■□□□□ 0.71
DUX3Q96PT4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DUX3Q96PT4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.48■□□□□ 0.71
DUX3Q96PT4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.48■□□□□ 0.71
DUX3Q96PT4 AC148477.6-201ENST00000623746 465 ntBASIC19.48■□□□□ 0.71
DUX3Q96PT4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.48■□□□□ 0.71
DUX3Q96PT4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DUX3Q96PT4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
DUX3Q96PT4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
DUX3Q96PT4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.47■□□□□ 0.71
DUX3Q96PT4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
DUX3Q96PT4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DUX3Q96PT4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
DUX3Q96PT4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
DUX3Q96PT4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.46■□□□□ 0.71
DUX3Q96PT4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
DUX3Q96PT4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
DUX3Q96PT4 RNF126P1-201ENST00000567452 1320 ntBASIC19.46■□□□□ 0.71
DUX3Q96PT4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUX3Q96PT4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUX3Q96PT4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DUX3Q96PT4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.45■□□□□ 0.7
DUX3Q96PT4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUX3Q96PT4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.45■□□□□ 0.7
DUX3Q96PT4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
DUX3Q96PT4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
DUX3Q96PT4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DUX3Q96PT4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.44■□□□□ 0.7
DUX3Q96PT4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
DUX3Q96PT4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
DUX3Q96PT4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
DUX3Q96PT4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUX3Q96PT4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
DUX3Q96PT4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DUX3Q96PT4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
DUX3Q96PT4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUX3Q96PT4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUX3Q96PT4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
DUX3Q96PT4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.42■□□□□ 0.7
DUX3Q96PT4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
DUX3Q96PT4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
DUX3Q96PT4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DUX3Q96PT4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DUX3Q96PT4 AC060814.1-201ENST00000554326 538 ntBASIC19.41■□□□□ 0.7
DUX3Q96PT4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DUX3Q96PT4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DUX3Q96PT4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DUX3Q96PT4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DUX3Q96PT4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.4■□□□□ 0.7
DUX3Q96PT4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
DUX3Q96PT4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.4■□□□□ 0.7
DUX3Q96PT4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DUX3Q96PT4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.4■□□□□ 0.7
DUX3Q96PT4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
DUX3Q96PT4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.39■□□□□ 0.7
DUX3Q96PT4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.39■□□□□ 0.7
DUX3Q96PT4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX3Q96PT4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC19.39■□□□□ 0.69
DUX3Q96PT4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX3Q96PT4 ABHD17AP5-201ENST00000580133 923 ntBASIC19.39■□□□□ 0.69
DUX3Q96PT4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.39■□□□□ 0.69
DUX3Q96PT4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DUX3Q96PT4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DUX3Q96PT4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DUX3Q96PT4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DUX3Q96PT4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DUX3Q96PT4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DUX3Q96PT4 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.37■□□□□ 0.69
DUX3Q96PT4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DUX3Q96PT4 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.37■□□□□ 0.69
DUX3Q96PT4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.36■□□□□ 0.69
DUX3Q96PT4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.36■□□□□ 0.69
DUX3Q96PT4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DUX3Q96PT4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.36■□□□□ 0.69
DUX3Q96PT4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
DUX3Q96PT4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
DUX3Q96PT4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DUX3Q96PT4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DUX3Q96PT4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.36■□□□□ 0.69
DUX3Q96PT4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX3Q96PT4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX3Q96PT4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX3Q96PT4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DUX3Q96PT4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
DUX3Q96PT4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms