Protein–RNA interactions for Protein: Q96I51

RCC1L, RCC1-like G exchanging factor-like protein, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1LQ96I51 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.35■□□□□ 0.85
RCC1LQ96I51 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.35■□□□□ 0.85
RCC1LQ96I51 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RCC1LQ96I51 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1LQ96I51 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1LQ96I51 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.34■□□□□ 0.85
RCC1LQ96I51 MIR639-201ENST00000384974 98 ntBASIC20.34■□□□□ 0.85
RCC1LQ96I51 MIR4449-201ENST00000578365 66 ntBASIC20.34■□□□□ 0.85
RCC1LQ96I51 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1LQ96I51 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RCC1LQ96I51 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1LQ96I51 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1LQ96I51 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RCC1LQ96I51 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.33■□□□□ 0.85
RCC1LQ96I51 MIR6090-201ENST00000622481 60 ntBASIC20.33■□□□□ 0.85
RCC1LQ96I51 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RCC1LQ96I51 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RCC1LQ96I51 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCC1LQ96I51 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.32■□□□□ 0.84
RCC1LQ96I51 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RCC1LQ96I51 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RCC1LQ96I51 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCC1LQ96I51 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.31■□□□□ 0.84
RCC1LQ96I51 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RCC1LQ96I51 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RCC1LQ96I51 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.3■□□□□ 0.84
RCC1LQ96I51 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.3■□□□□ 0.84
RCC1LQ96I51 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCC1LQ96I51 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
RCC1LQ96I51 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RCC1LQ96I51 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
RCC1LQ96I51 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.29■□□□□ 0.84
RCC1LQ96I51 LINC01971-201ENST00000617888 1048 ntBASIC20.29■□□□□ 0.84
RCC1LQ96I51 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.29■□□□□ 0.84
RCC1LQ96I51 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.28■□□□□ 0.84
RCC1LQ96I51 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1LQ96I51 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1LQ96I51 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RCC1LQ96I51 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
RCC1LQ96I51 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RCC1LQ96I51 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RCC1LQ96I51 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RCC1LQ96I51 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.27■□□□□ 0.84
RCC1LQ96I51 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.27■□□□□ 0.84
RCC1LQ96I51 MIR3648-2-201ENST00000581792 180 ntBASIC20.27■□□□□ 0.84
RCC1LQ96I51 MIR3648-1-201ENST00000615959 180 ntBASIC20.27■□□□□ 0.84
RCC1LQ96I51 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1LQ96I51 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.26■□□□□ 0.83
RCC1LQ96I51 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RCC1LQ96I51 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1LQ96I51 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.26■□□□□ 0.83
RCC1LQ96I51 AC010864.1-201ENST00000609407 1511 ntBASIC20.26■□□□□ 0.83
RCC1LQ96I51 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RCC1LQ96I51 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RCC1LQ96I51 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.25■□□□□ 0.83
RCC1LQ96I51 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCC1LQ96I51 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCC1LQ96I51 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.25■□□□□ 0.83
RCC1LQ96I51 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCC1LQ96I51 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RCC1LQ96I51 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1LQ96I51 LINC01003-201ENST00000564834 1764 ntBASIC20.24■□□□□ 0.83
RCC1LQ96I51 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.24■□□□□ 0.83
RCC1LQ96I51 AC016575.1-201ENST00000607026 382 ntBASIC20.24■□□□□ 0.83
RCC1LQ96I51 DUX4L11-201ENST00000611504 1267 ntBASIC20.24■□□□□ 0.83
RCC1LQ96I51 DUX4L12-201ENST00000614593 1267 ntBASIC20.24■□□□□ 0.83
RCC1LQ96I51 DUX4L14-201ENST00000621227 1267 ntBASIC20.24■□□□□ 0.83
RCC1LQ96I51 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1LQ96I51 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1LQ96I51 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1LQ96I51 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RCC1LQ96I51 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RCC1LQ96I51 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RCC1LQ96I51 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.23■□□□□ 0.83
RCC1LQ96I51 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RCC1LQ96I51 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1LQ96I51 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1LQ96I51 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1LQ96I51 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.22■□□□□ 0.83
RCC1LQ96I51 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1LQ96I51 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RCC1LQ96I51 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.21■□□□□ 0.83
RCC1LQ96I51 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RCC1LQ96I51 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCC1LQ96I51 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RCC1LQ96I51 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms