Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.51■■■□□ 2.63
RPGRQ92834 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RPGRQ92834 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.5■■■□□ 2.63
RPGRQ92834 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.5■■■□□ 2.63
RPGRQ92834 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RPGRQ92834 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.49■■■□□ 2.63
RPGRQ92834 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.49■■■□□ 2.63
RPGRQ92834 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RPGRQ92834 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RPGRQ92834 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.49■■■□□ 2.63
RPGRQ92834 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RPGRQ92834 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.48■■■□□ 2.63
RPGRQ92834 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
RPGRQ92834 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RPGRQ92834 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.47■■■□□ 2.63
RPGRQ92834 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RPGRQ92834 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RPGRQ92834 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
RPGRQ92834 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
RPGRQ92834 AC007029.1-201ENST00000604183 313 ntBASIC31.46■■■□□ 2.63
RPGRQ92834 RARRES2P1-201ENST00000474487 481 ntBASIC31.45■■■□□ 2.63
RPGRQ92834 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.44■■■□□ 2.62
RPGRQ92834 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RPGRQ92834 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RPGRQ92834 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
RPGRQ92834 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
RPGRQ92834 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
RPGRQ92834 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RPGRQ92834 AP004833.2-201ENST00000532228 1454 ntBASIC31.41■■■□□ 2.62
RPGRQ92834 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
RPGRQ92834 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.41■■■□□ 2.62
RPGRQ92834 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.4■■■□□ 2.62
RPGRQ92834 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
RPGRQ92834 AC129492.7-201ENST00000622992 756 ntBASIC31.39■■■□□ 2.62
RPGRQ92834 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
RPGRQ92834 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RPGRQ92834 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RPGRQ92834 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RPGRQ92834 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
RPGRQ92834 AC133552.2-201ENST00000619106 1032 ntBASIC31.37■■■□□ 2.61
RPGRQ92834 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.37■■■□□ 2.61
RPGRQ92834 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.37■■■□□ 2.61
RPGRQ92834 AC009831.1-201ENST00000580420 1582 ntBASIC31.37■■■□□ 2.61
RPGRQ92834 ST7-AS1-201ENST00000456775 1889 ntBASIC31.37■■■□□ 2.61
RPGRQ92834 AL592293.1-201ENST00000502889 1188 ntBASIC31.36■■■□□ 2.61
RPGRQ92834 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
RPGRQ92834 AC100797.4-201ENST00000631653 1827 ntBASIC31.35■■■□□ 2.61
RPGRQ92834 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.35■■■□□ 2.61
RPGRQ92834 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRQ92834 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRQ92834 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRQ92834 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
RPGRQ92834 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRQ92834 DUX4L18-201ENST00000553347 1267 ntBASIC31.34■■■□□ 2.61
RPGRQ92834 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRQ92834 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.34■■■□□ 2.61
RPGRQ92834 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.34■■■□□ 2.61
RPGRQ92834 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RPGRQ92834 AL359258.2-201ENST00000564063 1566 ntBASIC31.34■■■□□ 2.61
RPGRQ92834 SMPD5-203ENST00000639008 1464 ntBASIC31.33■■■□□ 2.61
RPGRQ92834 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
RPGRQ92834 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RPGRQ92834 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RPGRQ92834 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC31.32■■■□□ 2.6
RPGRQ92834 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.32■■■□□ 2.6
RPGRQ92834 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
RPGRQ92834 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RPGRQ92834 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
RPGRQ92834 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.31■■■□□ 2.6
RPGRQ92834 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RPGRQ92834 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RPGRQ92834 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.29■■■□□ 2.6
RPGRQ92834 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
RPGRQ92834 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RPGRQ92834 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.28■■■□□ 2.6
RPGRQ92834 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.28■■■□□ 2.6
RPGRQ92834 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.28■■■□□ 2.6
RPGRQ92834 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRQ92834 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.27■■■□□ 2.6
RPGRQ92834 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRQ92834 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.27■■■□□ 2.6
RPGRQ92834 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRQ92834 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.27■■■□□ 2.6
RPGRQ92834 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
RPGRQ92834 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.26■■■□□ 2.6
RPGRQ92834 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
RPGRQ92834 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RPGRQ92834 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
RPGRQ92834 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RPGRQ92834 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC31.26■■■□□ 2.59
RPGRQ92834 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.26■■■□□ 2.59
RPGRQ92834 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.25■■■□□ 2.59
RPGRQ92834 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.25■■■□□ 2.59
RPGRQ92834 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
RPGRQ92834 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
RPGRQ92834 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.24■■■□□ 2.59
RPGRQ92834 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RPGRQ92834 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.23■■■□□ 2.59
RPGRQ92834 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RPGRQ92834 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.23■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms