Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SSH3Q8TE77 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SSH3Q8TE77 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SSH3Q8TE77 HLA-V-202ENST00000446817 847 ntBASIC31.41■■■□□ 2.62
SSH3Q8TE77 AC008813.1-201ENST00000536597 885 ntBASIC31.41■■■□□ 2.62
SSH3Q8TE77 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.41■■■□□ 2.62
SSH3Q8TE77 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SSH3Q8TE77 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SSH3Q8TE77 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SSH3Q8TE77 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SSH3Q8TE77 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SSH3Q8TE77 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
SSH3Q8TE77 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.39■■■□□ 2.62
SSH3Q8TE77 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SSH3Q8TE77 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.38■■■□□ 2.61
SSH3Q8TE77 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
SSH3Q8TE77 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.36■■■□□ 2.61
SSH3Q8TE77 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SSH3Q8TE77 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SSH3Q8TE77 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
SSH3Q8TE77 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SSH3Q8TE77 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SSH3Q8TE77 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
SSH3Q8TE77 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
SSH3Q8TE77 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SSH3Q8TE77 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.34■■■□□ 2.61
SSH3Q8TE77 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SSH3Q8TE77 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SSH3Q8TE77 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
SSH3Q8TE77 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.34■■■□□ 2.61
SSH3Q8TE77 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
SSH3Q8TE77 AC148477.6-201ENST00000623746 465 ntBASIC31.33■■■□□ 2.61
SSH3Q8TE77 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.33■■■□□ 2.61
SSH3Q8TE77 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SSH3Q8TE77 LINC01003-201ENST00000564834 1764 ntBASIC31.33■■■□□ 2.61
SSH3Q8TE77 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
SSH3Q8TE77 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.31■■■□□ 2.6
SSH3Q8TE77 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
SSH3Q8TE77 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
SSH3Q8TE77 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.3■■■□□ 2.6
SSH3Q8TE77 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.29■■■□□ 2.6
SSH3Q8TE77 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SSH3Q8TE77 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SSH3Q8TE77 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SSH3Q8TE77 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SSH3Q8TE77 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SSH3Q8TE77 BX255925.1-201ENST00000566954 1854 ntBASIC31.27■■■□□ 2.6
SSH3Q8TE77 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SSH3Q8TE77 MIR4449-201ENST00000578365 66 ntBASIC31.27■■■□□ 2.6
SSH3Q8TE77 MIR219A2-201ENST00000608502 1504 ntBASIC31.26■■■□□ 2.59
SSH3Q8TE77 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SSH3Q8TE77 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SSH3Q8TE77 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
SSH3Q8TE77 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
SSH3Q8TE77 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SSH3Q8TE77 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SSH3Q8TE77 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SSH3Q8TE77 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.25■■■□□ 2.59
SSH3Q8TE77 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SSH3Q8TE77 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
SSH3Q8TE77 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.24■■■□□ 2.59
SSH3Q8TE77 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SSH3Q8TE77 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SSH3Q8TE77 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
SSH3Q8TE77 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.22■■■□□ 2.59
SSH3Q8TE77 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SSH3Q8TE77 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.22■■■□□ 2.59
SSH3Q8TE77 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SSH3Q8TE77 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SSH3Q8TE77 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SSH3Q8TE77 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.19■■■□□ 2.58
SSH3Q8TE77 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
SSH3Q8TE77 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SSH3Q8TE77 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SSH3Q8TE77 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SSH3Q8TE77 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SSH3Q8TE77 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SSH3Q8TE77 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
SSH3Q8TE77 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.17■■■□□ 2.58
SSH3Q8TE77 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SSH3Q8TE77 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
SSH3Q8TE77 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
SSH3Q8TE77 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SSH3Q8TE77 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.15■■■□□ 2.58
SSH3Q8TE77 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SSH3Q8TE77 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SSH3Q8TE77 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SSH3Q8TE77 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
SSH3Q8TE77 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.14■■■□□ 2.58
SSH3Q8TE77 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SSH3Q8TE77 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
SSH3Q8TE77 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
SSH3Q8TE77 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
SSH3Q8TE77 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
SSH3Q8TE77 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
SSH3Q8TE77 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SSH3Q8TE77 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.13■■■□□ 2.57
SSH3Q8TE77 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SSH3Q8TE77 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms