Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.16■■□□□ 1.62
CFAP61Q8NHU2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFAP61Q8NHU2 AC135983.2-203ENST00000454486 1613 ntBASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 WHAMMP2-203ENST00000563942 1603 ntBASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 AP004833.2-201ENST00000532228 1454 ntBASIC25.15■■□□□ 1.62
CFAP61Q8NHU2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.14■■□□□ 1.62
CFAP61Q8NHU2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
CFAP61Q8NHU2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CFAP61Q8NHU2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CFAP61Q8NHU2 ABHD17AP4-201ENST00000411545 909 ntBASIC25.14■■□□□ 1.62
CFAP61Q8NHU2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
CFAP61Q8NHU2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP61Q8NHU2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CFAP61Q8NHU2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP61Q8NHU2 ZNRF2P2-203ENST00000454624 420 ntBASIC25.12■■□□□ 1.61
CFAP61Q8NHU2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.12■■□□□ 1.61
CFAP61Q8NHU2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CFAP61Q8NHU2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CFAP61Q8NHU2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.1■■□□□ 1.61
CFAP61Q8NHU2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP61Q8NHU2 AC100797.4-201ENST00000631653 1827 ntBASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CFAP61Q8NHU2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP61Q8NHU2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP61Q8NHU2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP61Q8NHU2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFAP61Q8NHU2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
CFAP61Q8NHU2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP61Q8NHU2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.07■■□□□ 1.6
CFAP61Q8NHU2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFAP61Q8NHU2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.06■■□□□ 1.6
CFAP61Q8NHU2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.06■■□□□ 1.6
CFAP61Q8NHU2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP61Q8NHU2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.06■■□□□ 1.6
CFAP61Q8NHU2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.06■■□□□ 1.6
CFAP61Q8NHU2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFAP61Q8NHU2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.05■■□□□ 1.6
CFAP61Q8NHU2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CFAP61Q8NHU2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP61Q8NHU2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CFAP61Q8NHU2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CFAP61Q8NHU2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP61Q8NHU2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP61Q8NHU2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CFAP61Q8NHU2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CFAP61Q8NHU2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.02■■□□□ 1.6
CFAP61Q8NHU2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP61Q8NHU2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP61Q8NHU2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.01■■□□□ 1.59
CFAP61Q8NHU2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFAP61Q8NHU2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25■■□□□ 1.59
CFAP61Q8NHU2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFAP61Q8NHU2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25■■□□□ 1.59
CFAP61Q8NHU2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP61Q8NHU2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFAP61Q8NHU2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
CFAP61Q8NHU2 LINC01971-201ENST00000617888 1048 ntBASIC24.99■■□□□ 1.59
CFAP61Q8NHU2 AL449106.1-201ENST00000608517 1980 ntBASIC24.98■■□□□ 1.59
CFAP61Q8NHU2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP61Q8NHU2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP61Q8NHU2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFAP61Q8NHU2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.98■■□□□ 1.59
CFAP61Q8NHU2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.98■■□□□ 1.59
CFAP61Q8NHU2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP61Q8NHU2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP61Q8NHU2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.97■■□□□ 1.59
CFAP61Q8NHU2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFAP61Q8NHU2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
CFAP61Q8NHU2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CFAP61Q8NHU2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP61Q8NHU2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CFAP61Q8NHU2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms