Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TTC39CQ8N584 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
TTC39CQ8N584 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TTC39CQ8N584 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TTC39CQ8N584 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.91■■□□□ 1.9
TTC39CQ8N584 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
TTC39CQ8N584 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.9■■□□□ 1.9
TTC39CQ8N584 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TTC39CQ8N584 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TTC39CQ8N584 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
TTC39CQ8N584 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TTC39CQ8N584 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.89■■□□□ 1.9
TTC39CQ8N584 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
TTC39CQ8N584 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.89■■□□□ 1.9
TTC39CQ8N584 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
TTC39CQ8N584 AC148477.6-201ENST00000623746 465 ntBASIC26.89■■□□□ 1.9
TTC39CQ8N584 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
TTC39CQ8N584 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
TTC39CQ8N584 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
TTC39CQ8N584 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TTC39CQ8N584 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TTC39CQ8N584 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TTC39CQ8N584 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TTC39CQ8N584 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TTC39CQ8N584 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TTC39CQ8N584 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
TTC39CQ8N584 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TTC39CQ8N584 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
TTC39CQ8N584 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.85■■□□□ 1.89
TTC39CQ8N584 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.84■■□□□ 1.89
TTC39CQ8N584 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.84■■□□□ 1.89
TTC39CQ8N584 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
TTC39CQ8N584 LINC01003-201ENST00000564834 1764 ntBASIC26.84■■□□□ 1.89
TTC39CQ8N584 BX255925.1-201ENST00000566954 1854 ntBASIC26.83■■□□□ 1.89
TTC39CQ8N584 HLA-V-202ENST00000446817 847 ntBASIC26.83■■□□□ 1.89
TTC39CQ8N584 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.83■■□□□ 1.89
TTC39CQ8N584 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
TTC39CQ8N584 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.83■■□□□ 1.88
TTC39CQ8N584 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TTC39CQ8N584 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
TTC39CQ8N584 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.82■■□□□ 1.88
TTC39CQ8N584 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.82■■□□□ 1.88
TTC39CQ8N584 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TTC39CQ8N584 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
TTC39CQ8N584 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.81■■□□□ 1.88
TTC39CQ8N584 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.81■■□□□ 1.88
TTC39CQ8N584 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TTC39CQ8N584 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TTC39CQ8N584 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
TTC39CQ8N584 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
TTC39CQ8N584 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TTC39CQ8N584 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
TTC39CQ8N584 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
TTC39CQ8N584 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.79■■□□□ 1.88
TTC39CQ8N584 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TTC39CQ8N584 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
TTC39CQ8N584 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
TTC39CQ8N584 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TTC39CQ8N584 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.78■■□□□ 1.88
TTC39CQ8N584 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TTC39CQ8N584 MIR219A2-201ENST00000608502 1504 ntBASIC26.77■■□□□ 1.88
TTC39CQ8N584 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.77■■□□□ 1.88
TTC39CQ8N584 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
TTC39CQ8N584 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
TTC39CQ8N584 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
TTC39CQ8N584 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TTC39CQ8N584 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.75■■□□□ 1.87
TTC39CQ8N584 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
TTC39CQ8N584 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.74■■□□□ 1.87
TTC39CQ8N584 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.74■■□□□ 1.87
TTC39CQ8N584 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TTC39CQ8N584 MIR4449-201ENST00000578365 66 ntBASIC26.73■■□□□ 1.87
TTC39CQ8N584 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.73■■□□□ 1.87
TTC39CQ8N584 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TTC39CQ8N584 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC39CQ8N584 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TTC39CQ8N584 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.72■■□□□ 1.87
TTC39CQ8N584 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TTC39CQ8N584 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39CQ8N584 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39CQ8N584 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC39CQ8N584 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TTC39CQ8N584 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.7■■□□□ 1.87
TTC39CQ8N584 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39CQ8N584 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39CQ8N584 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39CQ8N584 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39CQ8N584 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC39CQ8N584 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.7■■□□□ 1.86
TTC39CQ8N584 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.7■■□□□ 1.86
TTC39CQ8N584 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC39CQ8N584 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms