Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.98■■□□□ 1.43
ARHGEF39Q8N4T4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
ARHGEF39Q8N4T4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
ARHGEF39Q8N4T4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
ARHGEF39Q8N4T4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
ARHGEF39Q8N4T4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
ARHGEF39Q8N4T4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
ARHGEF39Q8N4T4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
ARHGEF39Q8N4T4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
ARHGEF39Q8N4T4 MIR219A2-201ENST00000608502 1504 ntBASIC23.95■■□□□ 1.43
ARHGEF39Q8N4T4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.95■■□□□ 1.42
ARHGEF39Q8N4T4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ARHGEF39Q8N4T4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ARHGEF39Q8N4T4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ARHGEF39Q8N4T4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ARHGEF39Q8N4T4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.94■■□□□ 1.42
ARHGEF39Q8N4T4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.93■■□□□ 1.42
ARHGEF39Q8N4T4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ARHGEF39Q8N4T4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ARHGEF39Q8N4T4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.92■■□□□ 1.42
ARHGEF39Q8N4T4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ARHGEF39Q8N4T4 AC018358.1-201ENST00000631079 1402 ntBASIC23.92■■□□□ 1.42
ARHGEF39Q8N4T4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ARHGEF39Q8N4T4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
ARHGEF39Q8N4T4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ARHGEF39Q8N4T4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.91■■□□□ 1.42
ARHGEF39Q8N4T4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ARHGEF39Q8N4T4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ARHGEF39Q8N4T4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
ARHGEF39Q8N4T4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ARHGEF39Q8N4T4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ARHGEF39Q8N4T4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
ARHGEF39Q8N4T4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.89■■□□□ 1.41
ARHGEF39Q8N4T4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ARHGEF39Q8N4T4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.88■■□□□ 1.41
ARHGEF39Q8N4T4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ARHGEF39Q8N4T4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.87■■□□□ 1.41
ARHGEF39Q8N4T4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ARHGEF39Q8N4T4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ARHGEF39Q8N4T4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
ARHGEF39Q8N4T4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ARHGEF39Q8N4T4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ARHGEF39Q8N4T4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
ARHGEF39Q8N4T4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ARHGEF39Q8N4T4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
ARHGEF39Q8N4T4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ARHGEF39Q8N4T4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ARHGEF39Q8N4T4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
ARHGEF39Q8N4T4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ARHGEF39Q8N4T4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ARHGEF39Q8N4T4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ARHGEF39Q8N4T4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
ARHGEF39Q8N4T4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ARHGEF39Q8N4T4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
ARHGEF39Q8N4T4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.83■■□□□ 1.41
ARHGEF39Q8N4T4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
ARHGEF39Q8N4T4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ARHGEF39Q8N4T4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ARHGEF39Q8N4T4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.81■■□□□ 1.4
ARHGEF39Q8N4T4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ARHGEF39Q8N4T4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.81■■□□□ 1.4
ARHGEF39Q8N4T4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ARHGEF39Q8N4T4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ARHGEF39Q8N4T4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ARHGEF39Q8N4T4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARHGEF39Q8N4T4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ARHGEF39Q8N4T4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ARHGEF39Q8N4T4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.79■■□□□ 1.4
ARHGEF39Q8N4T4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.79■■□□□ 1.4
ARHGEF39Q8N4T4 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.79■■□□□ 1.4
ARHGEF39Q8N4T4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ARHGEF39Q8N4T4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms