Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.11■■□□□ 1.13
LYSMD2Q8IV50 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD2Q8IV50 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.1■■□□□ 1.13
LYSMD2Q8IV50 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD2Q8IV50 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
LYSMD2Q8IV50 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.09■■□□□ 1.13
LYSMD2Q8IV50 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD2Q8IV50 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LYSMD2Q8IV50 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LYSMD2Q8IV50 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
LYSMD2Q8IV50 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LYSMD2Q8IV50 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LYSMD2Q8IV50 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
LYSMD2Q8IV50 DUSP8P4-201ENST00000399538 1761 ntBASIC22.06■■□□□ 1.12
LYSMD2Q8IV50 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD2Q8IV50 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LYSMD2Q8IV50 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LYSMD2Q8IV50 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LYSMD2Q8IV50 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LYSMD2Q8IV50 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.05■■□□□ 1.12
LYSMD2Q8IV50 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD2Q8IV50 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LYSMD2Q8IV50 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
LYSMD2Q8IV50 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LYSMD2Q8IV50 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LYSMD2Q8IV50 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 AP004833.2-201ENST00000532228 1454 ntBASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.01■■□□□ 1.11
LYSMD2Q8IV50 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD2Q8IV50 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD2Q8IV50 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22■■□□□ 1.11
LYSMD2Q8IV50 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22■■□□□ 1.11
LYSMD2Q8IV50 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LYSMD2Q8IV50 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22■■□□□ 1.11
LYSMD2Q8IV50 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22■■□□□ 1.11
LYSMD2Q8IV50 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.99■■□□□ 1.11
LYSMD2Q8IV50 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD2Q8IV50 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
LYSMD2Q8IV50 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LYSMD2Q8IV50 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.97■■□□□ 1.11
LYSMD2Q8IV50 AC012676.1-201ENST00000574705 1949 ntBASIC21.97■■□□□ 1.11
LYSMD2Q8IV50 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD2Q8IV50 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD2Q8IV50 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD2Q8IV50 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.96■■□□□ 1.11
LYSMD2Q8IV50 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD2Q8IV50 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.96■■□□□ 1.11
LYSMD2Q8IV50 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD2Q8IV50 ERN1-208ENST00000606895 2068 ntBASIC21.95■■□□□ 1.11
LYSMD2Q8IV50 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.95■■□□□ 1.11
LYSMD2Q8IV50 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
LYSMD2Q8IV50 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD2Q8IV50 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LYSMD2Q8IV50 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD2Q8IV50 WASH5P-204ENST00000632292 975 ntBASIC21.94■■□□□ 1.1
LYSMD2Q8IV50 AC010864.1-201ENST00000609407 1511 ntBASIC21.93■■□□□ 1.1
LYSMD2Q8IV50 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD2Q8IV50 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.92■■□□□ 1.1
LYSMD2Q8IV50 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD2Q8IV50 AC092803.2-201ENST00000564287 1899 ntBASIC21.92■■□□□ 1.1
LYSMD2Q8IV50 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD2Q8IV50 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 211.5 ms