Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CHD1LQ86WJ1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
CHD1LQ86WJ1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD1LQ86WJ1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CHD1LQ86WJ1 AC110285.7-201ENST00000624417 1536 ntBASIC31.19■■■□□ 2.58
CHD1LQ86WJ1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.18■■■□□ 2.58
CHD1LQ86WJ1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CHD1LQ86WJ1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
CHD1LQ86WJ1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.18■■■□□ 2.58
CHD1LQ86WJ1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1LQ86WJ1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1LQ86WJ1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1LQ86WJ1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CHD1LQ86WJ1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CHD1LQ86WJ1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.16■■■□□ 2.58
CHD1LQ86WJ1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.16■■■□□ 2.58
CHD1LQ86WJ1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1LQ86WJ1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CHD1LQ86WJ1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.15■■■□□ 2.58
CHD1LQ86WJ1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.15■■■□□ 2.58
CHD1LQ86WJ1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CHD1LQ86WJ1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.15■■■□□ 2.58
CHD1LQ86WJ1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CHD1LQ86WJ1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
CHD1LQ86WJ1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHD1LQ86WJ1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.13■■■□□ 2.57
CHD1LQ86WJ1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CHD1LQ86WJ1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.12■■■□□ 2.57
CHD1LQ86WJ1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CHD1LQ86WJ1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.12■■■□□ 2.57
CHD1LQ86WJ1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CHD1LQ86WJ1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.11■■■□□ 2.57
CHD1LQ86WJ1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CHD1LQ86WJ1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
CHD1LQ86WJ1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1LQ86WJ1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CHD1LQ86WJ1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1LQ86WJ1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.09■■■□□ 2.57
CHD1LQ86WJ1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.09■■■□□ 2.57
CHD1LQ86WJ1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.09■■■□□ 2.57
CHD1LQ86WJ1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CHD1LQ86WJ1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1LQ86WJ1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CHD1LQ86WJ1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CHD1LQ86WJ1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.05■■■□□ 2.56
CHD1LQ86WJ1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1LQ86WJ1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CHD1LQ86WJ1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1LQ86WJ1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CHD1LQ86WJ1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.04■■■□□ 2.56
CHD1LQ86WJ1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.04■■■□□ 2.56
CHD1LQ86WJ1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.04■■■□□ 2.56
CHD1LQ86WJ1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
CHD1LQ86WJ1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1LQ86WJ1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1LQ86WJ1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
CHD1LQ86WJ1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CHD1LQ86WJ1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.03■■■□□ 2.56
CHD1LQ86WJ1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CHD1LQ86WJ1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CHD1LQ86WJ1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.02■■■□□ 2.56
CHD1LQ86WJ1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CHD1LQ86WJ1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CHD1LQ86WJ1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
CHD1LQ86WJ1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHD1LQ86WJ1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHD1LQ86WJ1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31■■■□□ 2.55
CHD1LQ86WJ1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CHD1LQ86WJ1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.98■■■□□ 2.55
CHD1LQ86WJ1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
CHD1LQ86WJ1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1LQ86WJ1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.97■■■□□ 2.55
CHD1LQ86WJ1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC30.97■■■□□ 2.55
CHD1LQ86WJ1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
CHD1LQ86WJ1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
CHD1LQ86WJ1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CHD1LQ86WJ1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.95■■■□□ 2.54
CHD1LQ86WJ1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.95■■■□□ 2.54
CHD1LQ86WJ1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.95■■■□□ 2.54
CHD1LQ86WJ1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1LQ86WJ1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.94■■■□□ 2.54
CHD1LQ86WJ1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.94■■■□□ 2.54
CHD1LQ86WJ1 LINC01971-201ENST00000617888 1048 ntBASIC30.94■■■□□ 2.54
CHD1LQ86WJ1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.94■■■□□ 2.54
CHD1LQ86WJ1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
CHD1LQ86WJ1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1LQ86WJ1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.93■■■□□ 2.54
CHD1LQ86WJ1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1LQ86WJ1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
CHD1LQ86WJ1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1LQ86WJ1 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.92■■■□□ 2.54
CHD1LQ86WJ1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CHD1LQ86WJ1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 423.1 ms