Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PPP4R3CPQ6ZMV5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PPP4R3CPQ6ZMV5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PPP4R3CPQ6ZMV5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.25■■■□□ 2.11
PPP4R3CPQ6ZMV5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
PPP4R3CPQ6ZMV5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
PPP4R3CPQ6ZMV5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4R3CPQ6ZMV5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4R3CPQ6ZMV5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4R3CPQ6ZMV5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PPP4R3CPQ6ZMV5 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.24■■■□□ 2.11
PPP4R3CPQ6ZMV5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4R3CPQ6ZMV5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
PPP4R3CPQ6ZMV5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
PPP4R3CPQ6ZMV5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
PPP4R3CPQ6ZMV5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.22■■■□□ 2.11
PPP4R3CPQ6ZMV5 MIR4449-201ENST00000578365 66 ntBASIC28.22■■■□□ 2.11
PPP4R3CPQ6ZMV5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4R3CPQ6ZMV5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPP4R3CPQ6ZMV5 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC28.21■■■□□ 2.11
PPP4R3CPQ6ZMV5 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC28.21■■■□□ 2.11
PPP4R3CPQ6ZMV5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.2■■■□□ 2.11
PPP4R3CPQ6ZMV5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.2■■■□□ 2.11
PPP4R3CPQ6ZMV5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PPP4R3CPQ6ZMV5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPP4R3CPQ6ZMV5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.2■■■□□ 2.1
PPP4R3CPQ6ZMV5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC28.2■■■□□ 2.1
PPP4R3CPQ6ZMV5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PPP4R3CPQ6ZMV5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPP4R3CPQ6ZMV5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPP4R3CPQ6ZMV5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPP4R3CPQ6ZMV5 AL845331.1-201ENST00000424978 1190 ntBASIC28.19■■■□□ 2.1
PPP4R3CPQ6ZMV5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPP4R3CPQ6ZMV5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PPP4R3CPQ6ZMV5 AC100797.4-201ENST00000631653 1827 ntBASIC28.15■■■□□ 2.1
PPP4R3CPQ6ZMV5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
PPP4R3CPQ6ZMV5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.15■■■□□ 2.1
PPP4R3CPQ6ZMV5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
PPP4R3CPQ6ZMV5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.15■■■□□ 2.1
PPP4R3CPQ6ZMV5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PPP4R3CPQ6ZMV5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PPP4R3CPQ6ZMV5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.14■■■□□ 2.09
PPP4R3CPQ6ZMV5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PPP4R3CPQ6ZMV5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.13■■■□□ 2.09
PPP4R3CPQ6ZMV5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.13■■■□□ 2.09
PPP4R3CPQ6ZMV5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.12■■■□□ 2.09
PPP4R3CPQ6ZMV5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.12■■■□□ 2.09
PPP4R3CPQ6ZMV5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.12■■■□□ 2.09
PPP4R3CPQ6ZMV5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3CPQ6ZMV5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PPP4R3CPQ6ZMV5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
PPP4R3CPQ6ZMV5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPP4R3CPQ6ZMV5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PPP4R3CPQ6ZMV5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PPP4R3CPQ6ZMV5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
PPP4R3CPQ6ZMV5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
PPP4R3CPQ6ZMV5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.1■■■□□ 2.09
PPP4R3CPQ6ZMV5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.09■■■□□ 2.09
PPP4R3CPQ6ZMV5 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC28.09■■■□□ 2.09
PPP4R3CPQ6ZMV5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PPP4R3CPQ6ZMV5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.08■■■□□ 2.09
PPP4R3CPQ6ZMV5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PPP4R3CPQ6ZMV5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PPP4R3CPQ6ZMV5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.06■■■□□ 2.08
PPP4R3CPQ6ZMV5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PPP4R3CPQ6ZMV5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
PPP4R3CPQ6ZMV5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.05■■■□□ 2.08
PPP4R3CPQ6ZMV5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
PPP4R3CPQ6ZMV5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3CPQ6ZMV5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
PPP4R3CPQ6ZMV5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.04■■■□□ 2.08
PPP4R3CPQ6ZMV5 AC110285.7-201ENST00000624417 1536 ntBASIC28.03■■■□□ 2.08
PPP4R3CPQ6ZMV5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
PPP4R3CPQ6ZMV5 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC28.03■■■□□ 2.08
PPP4R3CPQ6ZMV5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
PPP4R3CPQ6ZMV5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PPP4R3CPQ6ZMV5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
PPP4R3CPQ6ZMV5 AP002414.2-202ENST00000590929 1450 ntBASIC28.02■■■□□ 2.08
PPP4R3CPQ6ZMV5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PPP4R3CPQ6ZMV5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PPP4R3CPQ6ZMV5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PPP4R3CPQ6ZMV5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.08
PPP4R3CPQ6ZMV5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PPP4R3CPQ6ZMV5 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.01■■■□□ 2.07
PPP4R3CPQ6ZMV5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.01■■■□□ 2.07
PPP4R3CPQ6ZMV5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
PPP4R3CPQ6ZMV5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R3CPQ6ZMV5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R3CPQ6ZMV5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
PPP4R3CPQ6ZMV5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R3CPQ6ZMV5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PPP4R3CPQ6ZMV5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
PPP4R3CPQ6ZMV5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PPP4R3CPQ6ZMV5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms