Protein–RNA interactions for Protein: Q6PJ21

SPSB3, SPRY domain-containing SOCS box protein 3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3Q6PJ21 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPSB3Q6PJ21 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.19■□□□□ 0.82
SPSB3Q6PJ21 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 AP006261.1-201ENST00000584783 668 ntBASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPSB3Q6PJ21 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SPSB3Q6PJ21 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SPSB3Q6PJ21 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPSB3Q6PJ21 MIR3665-201ENST00000578708 105 ntBASIC20.17■□□□□ 0.82
SPSB3Q6PJ21 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPSB3Q6PJ21 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPSB3Q6PJ21 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPSB3Q6PJ21 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.15■□□□□ 0.82
SPSB3Q6PJ21 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPSB3Q6PJ21 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPSB3Q6PJ21 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPSB3Q6PJ21 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPSB3Q6PJ21 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SPSB3Q6PJ21 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
SPSB3Q6PJ21 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 AC145676.1-201ENST00000514988 2004 ntBASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPSB3Q6PJ21 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.11■□□□□ 0.81
SPSB3Q6PJ21 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPSB3Q6PJ21 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SPSB3Q6PJ21 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.1■□□□□ 0.81
SPSB3Q6PJ21 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPSB3Q6PJ21 AC108673.1-201ENST00000510422 1159 ntBASIC20.1■□□□□ 0.81
SPSB3Q6PJ21 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SPSB3Q6PJ21 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPSB3Q6PJ21 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPSB3Q6PJ21 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 DUX4L28-201ENST00000623687 678 ntBASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPSB3Q6PJ21 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.08■□□□□ 0.81
SPSB3Q6PJ21 AP004833.2-201ENST00000532228 1454 ntBASIC20.08■□□□□ 0.81
SPSB3Q6PJ21 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.08■□□□□ 0.81
SPSB3Q6PJ21 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SPSB3Q6PJ21 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPSB3Q6PJ21 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPSB3Q6PJ21 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPSB3Q6PJ21 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.06■□□□□ 0.8
SPSB3Q6PJ21 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPSB3Q6PJ21 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 AC127502.1-201ENST00000399971 1502 ntBASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.05■□□□□ 0.8
SPSB3Q6PJ21 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPSB3Q6PJ21 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.04■□□□□ 0.8
SPSB3Q6PJ21 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.04■□□□□ 0.8
SPSB3Q6PJ21 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPSB3Q6PJ21 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPSB3Q6PJ21 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SPSB3Q6PJ21 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms