Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.62■■■□□ 2.01
CNKSR3Q6P9H4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CNKSR3Q6P9H4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CNKSR3Q6P9H4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.61■■■□□ 2.01
CNKSR3Q6P9H4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.6■■■□□ 2.01
CNKSR3Q6P9H4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CNKSR3Q6P9H4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.6■■■□□ 2.01
CNKSR3Q6P9H4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.6■■■□□ 2.01
CNKSR3Q6P9H4 AL592293.1-201ENST00000502889 1188 ntBASIC27.59■■■□□ 2.01
CNKSR3Q6P9H4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.59■■■□□ 2.01
CNKSR3Q6P9H4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.59■■■□□ 2.01
CNKSR3Q6P9H4 AC133552.2-201ENST00000619106 1032 ntBASIC27.58■■■□□ 2.01
CNKSR3Q6P9H4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
CNKSR3Q6P9H4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.58■■■□□ 2
CNKSR3Q6P9H4 AC009831.1-201ENST00000580420 1582 ntBASIC27.57■■■□□ 2
CNKSR3Q6P9H4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CNKSR3Q6P9H4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.57■■■□□ 2
CNKSR3Q6P9H4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.57■■■□□ 2
CNKSR3Q6P9H4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
CNKSR3Q6P9H4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.56■■■□□ 2
CNKSR3Q6P9H4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.56■■■□□ 2
CNKSR3Q6P9H4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CNKSR3Q6P9H4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.55■■■□□ 2
CNKSR3Q6P9H4 DUX4L18-201ENST00000553347 1267 ntBASIC27.55■■■□□ 2
CNKSR3Q6P9H4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
CNKSR3Q6P9H4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CNKSR3Q6P9H4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC27.55■■■□□ 2
CNKSR3Q6P9H4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.55■■■□□ 2
CNKSR3Q6P9H4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
CNKSR3Q6P9H4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.54■■■□□ 2
CNKSR3Q6P9H4 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.54■■■□□ 2
CNKSR3Q6P9H4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.54■■■□□ 2
CNKSR3Q6P9H4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.54■■■□□ 2
CNKSR3Q6P9H4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC27.53■■■□□ 2
CNKSR3Q6P9H4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.53■■■□□ 2
CNKSR3Q6P9H4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CNKSR3Q6P9H4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.52■■■□□ 2
CNKSR3Q6P9H4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
CNKSR3Q6P9H4 SMPD5-203ENST00000639008 1464 ntBASIC27.51■■■□□ 2
CNKSR3Q6P9H4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
CNKSR3Q6P9H4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.51■■□□□ 1.99
CNKSR3Q6P9H4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CNKSR3Q6P9H4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CNKSR3Q6P9H4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CNKSR3Q6P9H4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CNKSR3Q6P9H4 AP004833.2-201ENST00000532228 1454 ntBASIC27.5■■□□□ 1.99
CNKSR3Q6P9H4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CNKSR3Q6P9H4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CNKSR3Q6P9H4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CNKSR3Q6P9H4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CNKSR3Q6P9H4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
CNKSR3Q6P9H4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
CNKSR3Q6P9H4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CNKSR3Q6P9H4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC27.48■■□□□ 1.99
CNKSR3Q6P9H4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
CNKSR3Q6P9H4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.47■■□□□ 1.99
CNKSR3Q6P9H4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
CNKSR3Q6P9H4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.46■■□□□ 1.99
CNKSR3Q6P9H4 AL359258.2-201ENST00000564063 1566 ntBASIC27.46■■□□□ 1.99
CNKSR3Q6P9H4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.99
CNKSR3Q6P9H4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
CNKSR3Q6P9H4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
CNKSR3Q6P9H4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.45■■□□□ 1.98
CNKSR3Q6P9H4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
CNKSR3Q6P9H4 AC026202.3-201ENST00000600805 1127 ntBASIC27.45■■□□□ 1.98
CNKSR3Q6P9H4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CNKSR3Q6P9H4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CNKSR3Q6P9H4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 AL035685.1-201ENST00000636663 812 ntBASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
CNKSR3Q6P9H4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CNKSR3Q6P9H4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CNKSR3Q6P9H4 AC025884.2-201ENST00000553429 711 ntBASIC27.41■■□□□ 1.98
CNKSR3Q6P9H4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CNKSR3Q6P9H4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
CNKSR3Q6P9H4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CNKSR3Q6P9H4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CNKSR3Q6P9H4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.4■■□□□ 1.98
CNKSR3Q6P9H4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.4■■□□□ 1.98
CNKSR3Q6P9H4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CNKSR3Q6P9H4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.39■■□□□ 1.98
CNKSR3Q6P9H4 AL451085.2-201ENST00000605085 799 ntBASIC27.39■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms