Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.51■■□□□ 1.19
LRRK2Q5S007 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRK2Q5S007 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.51■■□□□ 1.19
LRRK2Q5S007 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.5■■□□□ 1.19
LRRK2Q5S007 AC135983.2-203ENST00000454486 1613 ntBASIC22.5■■□□□ 1.19
LRRK2Q5S007 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.5■■□□□ 1.19
LRRK2Q5S007 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRK2Q5S007 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LRRK2Q5S007 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
LRRK2Q5S007 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LRRK2Q5S007 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LRRK2Q5S007 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.49■■□□□ 1.19
LRRK2Q5S007 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.49■■□□□ 1.19
LRRK2Q5S007 AC074183.2-201ENST00000623112 922 ntBASIC22.49■■□□□ 1.19
LRRK2Q5S007 SMPD5-203ENST00000639008 1464 ntBASIC22.48■■□□□ 1.19
LRRK2Q5S007 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK2Q5S007 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK2Q5S007 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRK2Q5S007 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
LRRK2Q5S007 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK2Q5S007 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK2Q5S007 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LRRK2Q5S007 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.48■■□□□ 1.19
LRRK2Q5S007 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRK2Q5S007 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.47■■□□□ 1.19
LRRK2Q5S007 AC026202.3-201ENST00000600805 1127 ntBASIC22.47■■□□□ 1.19
LRRK2Q5S007 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LRRK2Q5S007 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LRRK2Q5S007 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.47■■□□□ 1.19
LRRK2Q5S007 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK2Q5S007 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK2Q5S007 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK2Q5S007 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK2Q5S007 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRK2Q5S007 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRK2Q5S007 AC008406.3-201ENST00000620001 1374 ntBASIC22.46■■□□□ 1.19
LRRK2Q5S007 AC103834.1-201ENST00000520383 144 ntBASIC22.46■■□□□ 1.19
LRRK2Q5S007 BHLHE23-202ENST00000612929 1109 ntBASIC22.46■■□□□ 1.19
LRRK2Q5S007 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
LRRK2Q5S007 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
LRRK2Q5S007 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRK2Q5S007 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.44■■□□□ 1.18
LRRK2Q5S007 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRK2Q5S007 AC126177.7-201ENST00000547904 679 ntBASIC22.43■■□□□ 1.18
LRRK2Q5S007 AC103724.3-201ENST00000564481 992 ntBASIC22.43■■□□□ 1.18
LRRK2Q5S007 MIR4508-201ENST00000584178 70 ntBASIC22.43■■□□□ 1.18
LRRK2Q5S007 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.43■■□□□ 1.18
LRRK2Q5S007 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK2Q5S007 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LRRK2Q5S007 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK2Q5S007 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.42■■□□□ 1.18
LRRK2Q5S007 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK2Q5S007 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRK2Q5S007 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
LRRK2Q5S007 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK2Q5S007 AC139795.1-202ENST00000500444 432 ntBASIC22.41■■□□□ 1.18
LRRK2Q5S007 MIR6765-201ENST00000614092 87 ntBASIC22.41■■□□□ 1.18
LRRK2Q5S007 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK2Q5S007 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.41■■□□□ 1.18
LRRK2Q5S007 AC010864.1-201ENST00000609407 1511 ntBASIC22.41■■□□□ 1.18
LRRK2Q5S007 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK2Q5S007 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRK2Q5S007 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRK2Q5S007 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.4■■□□□ 1.18
LRRK2Q5S007 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRRK2Q5S007 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRK2Q5S007 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRK2Q5S007 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.39■■□□□ 1.18
LRRK2Q5S007 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.39■■□□□ 1.18
LRRK2Q5S007 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.39■■□□□ 1.18
LRRK2Q5S007 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRK2Q5S007 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.38■■□□□ 1.17
LRRK2Q5S007 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
LRRK2Q5S007 SPCS2P3-201ENST00000500401 656 ntBASIC22.37■■□□□ 1.17
LRRK2Q5S007 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRRK2Q5S007 AC127502.1-201ENST00000399971 1502 ntBASIC22.36■■□□□ 1.17
LRRK2Q5S007 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.36■■□□□ 1.17
LRRK2Q5S007 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRK2Q5S007 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRRK2Q5S007 MIR638-201ENST00000385237 100 ntBASIC22.35■■□□□ 1.17
LRRK2Q5S007 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.35■■□□□ 1.17
LRRK2Q5S007 AC093536.1-201ENST00000569153 554 ntBASIC22.35■■□□□ 1.17
LRRK2Q5S007 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRK2Q5S007 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRK2Q5S007 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRK2Q5S007 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
LRRK2Q5S007 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.34■■□□□ 1.17
LRRK2Q5S007 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.34■■□□□ 1.17
LRRK2Q5S007 Z92544.1-202ENST00000571933 1220 ntBASIC22.34■■□□□ 1.17
LRRK2Q5S007 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRK2Q5S007 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRK2Q5S007 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRK2Q5S007 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRK2Q5S007 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
LRRK2Q5S007 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LRRK2Q5S007 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRK2Q5S007 AC239859.2-201ENST00000444165 318 ntBASIC22.32■■□□□ 1.16
LRRK2Q5S007 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.32■■□□□ 1.16
LRRK2Q5S007 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
LRRK2Q5S007 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms