Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L13-201ENST00000554103 1267 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L15-201ENST00000611059 1267 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L23-201ENST00000615195 1269 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L24-201ENST00000617576 1269 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L22-201ENST00000618238 1269 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L20-201ENST00000619712 1269 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L21-201ENST00000622058 1269 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L10-201ENST00000622460 1267 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 DUX4L25-201ENST00000624915 1269 ntBASIC19.39■□□□□ 0.69
TM4SF20Q53R12 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TM4SF20Q53R12 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF20Q53R12 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF20Q53R12 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TM4SF20Q53R12 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.38■□□□□ 0.69
TM4SF20Q53R12 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TM4SF20Q53R12 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF20Q53R12 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF20Q53R12 AP002414.2-202ENST00000590929 1450 ntBASIC19.37■□□□□ 0.69
TM4SF20Q53R12 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.37■□□□□ 0.69
TM4SF20Q53R12 AC135731.1-201ENST00000569415 2548 ntBASIC19.37■□□□□ 0.69
TM4SF20Q53R12 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.37■□□□□ 0.69
TM4SF20Q53R12 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM4SF20Q53R12 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF20Q53R12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM4SF20Q53R12 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TM4SF20Q53R12 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TM4SF20Q53R12 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM4SF20Q53R12 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF20Q53R12 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TM4SF20Q53R12 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF20Q53R12 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF20Q53R12 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM4SF20Q53R12 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM4SF20Q53R12 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF20Q53R12 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.32■□□□□ 0.68
TM4SF20Q53R12 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM4SF20Q53R12 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF20Q53R12 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF20Q53R12 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.31■□□□□ 0.68
TM4SF20Q53R12 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF20Q53R12 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM4SF20Q53R12 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 MIR3648-2-201ENST00000581792 180 ntBASIC19.3■□□□□ 0.68
TM4SF20Q53R12 MIR3648-1-201ENST00000615959 180 ntBASIC19.3■□□□□ 0.68
TM4SF20Q53R12 CR559946.2-201ENST00000623684 991 ntBASIC19.3■□□□□ 0.68
TM4SF20Q53R12 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM4SF20Q53R12 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF20Q53R12 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF20Q53R12 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF20Q53R12 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM4SF20Q53R12 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TM4SF20Q53R12 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM4SF20Q53R12 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TM4SF20Q53R12 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF20Q53R12 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF20Q53R12 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.27■□□□□ 0.68
TM4SF20Q53R12 AC016575.1-201ENST00000607026 382 ntBASIC19.27■□□□□ 0.68
TM4SF20Q53R12 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM4SF20Q53R12 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TM4SF20Q53R12 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM4SF20Q53R12 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TM4SF20Q53R12 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TM4SF20Q53R12 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM4SF20Q53R12 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms