Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TRIM60Q495X7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRIM60Q495X7 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.14■■■□□ 2.09
TRIM60Q495X7 AL592295.1-201ENST00000400984 884 ntBASIC28.13■■■□□ 2.09
TRIM60Q495X7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.13■■■□□ 2.09
TRIM60Q495X7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
TRIM60Q495X7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
TRIM60Q495X7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRIM60Q495X7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TRIM60Q495X7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.12■■■□□ 2.09
TRIM60Q495X7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.12■■■□□ 2.09
TRIM60Q495X7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
TRIM60Q495X7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM60Q495X7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TRIM60Q495X7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM60Q495X7 AL135925.1-201ENST00000605920 1701 ntBASIC28.09■■■□□ 2.09
TRIM60Q495X7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.09■■■□□ 2.09
TRIM60Q495X7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TRIM60Q495X7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM60Q495X7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TRIM60Q495X7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM60Q495X7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM60Q495X7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM60Q495X7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.07■■■□□ 2.08
TRIM60Q495X7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TRIM60Q495X7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
TRIM60Q495X7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.06■■■□□ 2.08
TRIM60Q495X7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
TRIM60Q495X7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TRIM60Q495X7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TRIM60Q495X7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
TRIM60Q495X7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TRIM60Q495X7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.04■■■□□ 2.08
TRIM60Q495X7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
TRIM60Q495X7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.04■■■□□ 2.08
TRIM60Q495X7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.04■■■□□ 2.08
TRIM60Q495X7 SMPD5-203ENST00000639008 1464 ntBASIC28.03■■■□□ 2.08
TRIM60Q495X7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TRIM60Q495X7 AC026202.3-201ENST00000600805 1127 ntBASIC28.03■■■□□ 2.08
TRIM60Q495X7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
TRIM60Q495X7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TRIM60Q495X7 AC019069.1-201ENST00000610008 1333 ntBASIC28.02■■■□□ 2.08
TRIM60Q495X7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TRIM60Q495X7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
TRIM60Q495X7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
TRIM60Q495X7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TRIM60Q495X7 DUX4L9-201ENST00000449051 1259 ntBASIC28.01■■■□□ 2.07
TRIM60Q495X7 AC010980.1-201ENST00000587192 1142 ntBASIC28.01■■■□□ 2.07
TRIM60Q495X7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
TRIM60Q495X7 KRT8P33-201ENST00000508125 1423 ntBASIC28.01■■■□□ 2.07
TRIM60Q495X7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
TRIM60Q495X7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28■■■□□ 2.07
TRIM60Q495X7 BHLHE23-202ENST00000612929 1109 ntBASIC28■■■□□ 2.07
TRIM60Q495X7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.99■■■□□ 2.07
TRIM60Q495X7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC27.99■■■□□ 2.07
TRIM60Q495X7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TRIM60Q495X7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TRIM60Q495X7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TRIM60Q495X7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.98■■■□□ 2.07
TRIM60Q495X7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TRIM60Q495X7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.98■■■□□ 2.07
TRIM60Q495X7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.98■■■□□ 2.07
TRIM60Q495X7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
TRIM60Q495X7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.97■■■□□ 2.07
TRIM60Q495X7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
TRIM60Q495X7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
TRIM60Q495X7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
TRIM60Q495X7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
TRIM60Q495X7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
TRIM60Q495X7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.96■■■□□ 2.07
TRIM60Q495X7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.96■■■□□ 2.07
TRIM60Q495X7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.95■■■□□ 2.07
TRIM60Q495X7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TRIM60Q495X7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
TRIM60Q495X7 AC009299.2-201ENST00000482477 511 ntBASIC27.95■■■□□ 2.06
TRIM60Q495X7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.95■■■□□ 2.06
TRIM60Q495X7 AL359258.2-201ENST00000564063 1566 ntBASIC27.93■■■□□ 2.06
TRIM60Q495X7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
TRIM60Q495X7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.92■■■□□ 2.06
TRIM60Q495X7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TRIM60Q495X7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
TRIM60Q495X7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
TRIM60Q495X7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
TRIM60Q495X7 RP9P-202ENST00000450133 1212 ntBASIC27.91■■■□□ 2.06
TRIM60Q495X7 SPCS2P3-201ENST00000500401 656 ntBASIC27.91■■■□□ 2.06
TRIM60Q495X7 AC131212.1-201ENST00000613771 668 ntBASIC27.91■■■□□ 2.06
TRIM60Q495X7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
TRIM60Q495X7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.91■■■□□ 2.06
TRIM60Q495X7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.9■■■□□ 2.06
TRIM60Q495X7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.9■■■□□ 2.06
TRIM60Q495X7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
TRIM60Q495X7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms