Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMC4P56277 AC018358.1-201ENST00000631079 1402 ntBASIC18.75■□□□□ 0.59
CMC4P56277 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CMC4P56277 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMC4P56277 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CMC4P56277 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMC4P56277 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CMC4P56277 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CMC4P56277 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMC4P56277 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CMC4P56277 MIR4449-201ENST00000578365 66 ntBASIC18.74■□□□□ 0.59
CMC4P56277 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 AC126177.7-201ENST00000547904 679 ntBASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.73■□□□□ 0.59
CMC4P56277 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CMC4P56277 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMC4P56277 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMC4P56277 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CMC4P56277 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CMC4P56277 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMC4P56277 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMC4P56277 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.71■□□□□ 0.59
CMC4P56277 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.71■□□□□ 0.59
CMC4P56277 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CMC4P56277 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CMC4P56277 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CMC4P56277 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMC4P56277 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMC4P56277 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.7■□□□□ 0.58
CMC4P56277 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMC4P56277 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMC4P56277 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
CMC4P56277 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CMC4P56277 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.7■□□□□ 0.58
CMC4P56277 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CMC4P56277 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMC4P56277 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CMC4P56277 DRD5P2-201ENST00000421395 2012 ntBASIC18.69■□□□□ 0.58
CMC4P56277 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CMC4P56277 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMC4P56277 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CMC4P56277 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CMC4P56277 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.68■□□□□ 0.58
CMC4P56277 AC142086.6-201ENST00000621154 1765 ntBASIC18.68■□□□□ 0.58
CMC4P56277 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CMC4P56277 MIR219A2-201ENST00000608502 1504 ntBASIC18.68■□□□□ 0.58
CMC4P56277 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CMC4P56277 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CMC4P56277 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMC4P56277 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMC4P56277 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.67■□□□□ 0.58
CMC4P56277 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CMC4P56277 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.67■□□□□ 0.58
CMC4P56277 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.67■□□□□ 0.58
CMC4P56277 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CMC4P56277 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CMC4P56277 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CMC4P56277 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CMC4P56277 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CMC4P56277 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMC4P56277 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CMC4P56277 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CMC4P56277 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CMC4P56277 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CMC4P56277 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.65■□□□□ 0.58
CMC4P56277 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.64■□□□□ 0.57
CMC4P56277 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMC4P56277 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CMC4P56277 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CMC4P56277 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CMC4P56277 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.64■□□□□ 0.57
CMC4P56277 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CMC4P56277 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CMC4P56277 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.63■□□□□ 0.57
CMC4P56277 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.63■□□□□ 0.57
CMC4P56277 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.63■□□□□ 0.57
CMC4P56277 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMC4P56277 AC139426.1-201ENST00000568218 2529 ntBASIC18.63■□□□□ 0.57
CMC4P56277 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMC4P56277 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CMC4P56277 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CMC4P56277 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.62■□□□□ 0.57
CMC4P56277 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.62■□□□□ 0.57
CMC4P56277 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CMC4P56277 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CMC4P56277 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CMC4P56277 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms