Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MIR3648-2-201ENST00000581792 180 ntBASIC26.44■■□□□ 1.82
SCNN1AP37088 MIR3648-1-201ENST00000615959 180 ntBASIC26.44■■□□□ 1.82
SCNN1AP37088 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SCNN1AP37088 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCNN1AP37088 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SCNN1AP37088 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SCNN1AP37088 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.43■■□□□ 1.82
SCNN1AP37088 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCNN1AP37088 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.42■■□□□ 1.82
SCNN1AP37088 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCNN1AP37088 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
SCNN1AP37088 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCNN1AP37088 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SCNN1AP37088 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.41■■□□□ 1.82
SCNN1AP37088 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.4■■□□□ 1.82
SCNN1AP37088 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SCNN1AP37088 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SCNN1AP37088 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SCNN1AP37088 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCNN1AP37088 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCNN1AP37088 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.38■■□□□ 1.81
SCNN1AP37088 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SCNN1AP37088 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SCNN1AP37088 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCNN1AP37088 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCNN1AP37088 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCNN1AP37088 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCNN1AP37088 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SCNN1AP37088 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SCNN1AP37088 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SCNN1AP37088 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SCNN1AP37088 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
SCNN1AP37088 AC148477.6-201ENST00000623746 465 ntBASIC26.34■■□□□ 1.81
SCNN1AP37088 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SCNN1AP37088 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.33■■□□□ 1.81
SCNN1AP37088 AC016575.1-201ENST00000607026 382 ntBASIC26.33■■□□□ 1.81
SCNN1AP37088 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
SCNN1AP37088 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SCNN1AP37088 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
SCNN1AP37088 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.31■■□□□ 1.8
SCNN1AP37088 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCNN1AP37088 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SCNN1AP37088 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SCNN1AP37088 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SCNN1AP37088 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SCNN1AP37088 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCNN1AP37088 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCNN1AP37088 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SCNN1AP37088 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.28■■□□□ 1.8
SCNN1AP37088 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SCNN1AP37088 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
SCNN1AP37088 HLA-V-202ENST00000446817 847 ntBASIC26.27■■□□□ 1.8
SCNN1AP37088 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
SCNN1AP37088 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SCNN1AP37088 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.27■■□□□ 1.8
SCNN1AP37088 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCNN1AP37088 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.26■■□□□ 1.79
SCNN1AP37088 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCNN1AP37088 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SCNN1AP37088 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.26■■□□□ 1.79
SCNN1AP37088 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SCNN1AP37088 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCNN1AP37088 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SCNN1AP37088 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.25■■□□□ 1.79
SCNN1AP37088 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
SCNN1AP37088 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.25■■□□□ 1.79
SCNN1AP37088 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCNN1AP37088 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.24■■□□□ 1.79
SCNN1AP37088 MIR219A2-201ENST00000608502 1504 ntBASIC26.24■■□□□ 1.79
SCNN1AP37088 MIR639-201ENST00000384974 98 ntBASIC26.23■■□□□ 1.79
SCNN1AP37088 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.23■■□□□ 1.79
SCNN1AP37088 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCNN1AP37088 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.22■■□□□ 1.79
SCNN1AP37088 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.22■■□□□ 1.79
SCNN1AP37088 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCNN1AP37088 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCNN1AP37088 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
SCNN1AP37088 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCNN1AP37088 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.21■■□□□ 1.79
SCNN1AP37088 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.21■■□□□ 1.79
SCNN1AP37088 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
SCNN1AP37088 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SCNN1AP37088 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SCNN1AP37088 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SCNN1AP37088 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SCNN1AP37088 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SCNN1AP37088 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
SCNN1AP37088 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SCNN1AP37088 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SCNN1AP37088 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
SCNN1AP37088 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
SCNN1AP37088 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SCNN1AP37088 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCNN1AP37088 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SCNN1AP37088 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCNN1AP37088 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.17■■□□□ 1.78
SCNN1AP37088 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SCNN1AP37088 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SCNN1AP37088 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SCNN1AP37088 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms