Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCK1P35558 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCK1P35558 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PCK1P35558 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
PCK1P35558 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCK1P35558 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.32■■□□□ 1.8
PCK1P35558 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.32■■□□□ 1.8
PCK1P35558 LINC01971-201ENST00000617888 1048 ntBASIC26.32■■□□□ 1.8
PCK1P35558 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCK1P35558 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.31■■□□□ 1.8
PCK1P35558 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.31■■□□□ 1.8
PCK1P35558 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PCK1P35558 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCK1P35558 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCK1P35558 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCK1P35558 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCK1P35558 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.29■■□□□ 1.8
PCK1P35558 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCK1P35558 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PCK1P35558 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.28■■□□□ 1.8
PCK1P35558 AL121749.1-202ENST00000609313 2153 ntBASIC26.28■■□□□ 1.8
PCK1P35558 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCK1P35558 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PCK1P35558 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCK1P35558 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.28■■□□□ 1.8
PCK1P35558 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.27■■□□□ 1.8
PCK1P35558 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.27■■□□□ 1.8
PCK1P35558 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCK1P35558 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PCK1P35558 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCK1P35558 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.26■■□□□ 1.79
PCK1P35558 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCK1P35558 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCK1P35558 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCK1P35558 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCK1P35558 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
PCK1P35558 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
PCK1P35558 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCK1P35558 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PCK1P35558 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.25■■□□□ 1.79
PCK1P35558 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PCK1P35558 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.24■■□□□ 1.79
PCK1P35558 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.24■■□□□ 1.79
PCK1P35558 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCK1P35558 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCK1P35558 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
PCK1P35558 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.23■■□□□ 1.79
PCK1P35558 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCK1P35558 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCK1P35558 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCK1P35558 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
PCK1P35558 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCK1P35558 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCK1P35558 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCK1P35558 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PCK1P35558 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.22■■□□□ 1.79
PCK1P35558 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.2■■□□□ 1.79
PCK1P35558 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L13-201ENST00000554103 1267 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L15-201ENST00000611059 1267 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L23-201ENST00000615195 1269 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L24-201ENST00000617576 1269 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L22-201ENST00000618238 1269 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L20-201ENST00000619712 1269 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L21-201ENST00000622058 1269 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L10-201ENST00000622460 1267 ntBASIC26.2■■□□□ 1.78
PCK1P35558 DUX4L25-201ENST00000624915 1269 ntBASIC26.2■■□□□ 1.78
PCK1P35558 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCK1P35558 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCK1P35558 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCK1P35558 ZNRF2P2-203ENST00000454624 420 ntBASIC26.19■■□□□ 1.78
PCK1P35558 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.19■■□□□ 1.78
PCK1P35558 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCK1P35558 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCK1P35558 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCK1P35558 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PCK1P35558 DUX4L11-201ENST00000611504 1267 ntBASIC26.17■■□□□ 1.78
PCK1P35558 DUX4L12-201ENST00000614593 1267 ntBASIC26.17■■□□□ 1.78
PCK1P35558 DUX4L14-201ENST00000621227 1267 ntBASIC26.17■■□□□ 1.78
PCK1P35558 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCK1P35558 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCK1P35558 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCK1P35558 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCK1P35558 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCK1P35558 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCK1P35558 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PCK1P35558 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
PCK1P35558 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.15■■□□□ 1.78
PCK1P35558 AC135731.1-201ENST00000569415 2548 ntBASIC26.15■■□□□ 1.78
PCK1P35558 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCK1P35558 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCK1P35558 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
PCK1P35558 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCK1P35558 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.13■■□□□ 1.77
PCK1P35558 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCK1P35558 ABHD17AP4-201ENST00000411545 909 ntBASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms