Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 SSC1YJR045C 1965 nt7.95□□□□□ -1.14
MSH1P25846 HHY1YEL059W 309 nt7.95□□□□□ -1.14
MSH1P25846 YMR166CYMR166C 1107 nt7.95□□□□□ -1.14
MSH1P25846 CKI1YLR133W 1749 nt7.95□□□□□ -1.14
MSH1P25846 TRR1YDR353W 960 nt7.94□□□□□ -1.14
MSH1P25846 LOT6YLR011W 576 nt7.94□□□□□ -1.14
MSH1P25846 EXG2YDR261C 1689 nt7.94□□□□□ -1.14
MSH1P25846 RQC1YDR333C 2172 nt7.93□□□□□ -1.14
MSH1P25846 YTH1YPR107C 627 nt7.93□□□□□ -1.14
MSH1P25846 AIM2YAL049C 741 nt7.92□□□□□ -1.14
MSH1P25846 PET10YKR046C 852 nt7.92□□□□□ -1.14
MSH1P25846 IDP3YNL009W 1263 nt7.92□□□□□ -1.14
MSH1P25846 LSP1YPL004C 1026 nt7.92□□□□□ -1.14
MSH1P25846 KDX1YKL161C 1302 nt7.92□□□□□ -1.14
MSH1P25846 EDC3YEL015W 1656 nt7.92□□□□□ -1.14
MSH1P25846 SEC23YPR181C 2307 nt7.91□□□□□ -1.14
MSH1P25846 ATG22YCL038C 1587 nt7.91□□□□□ -1.14
MSH1P25846 KIN1YDR122W 3195 nt7.91□□□□□ -1.14
MSH1P25846 YHR131CYHR131C 2553 nt7.9□□□□□ -1.14
MSH1P25846 NUP57YGR119C 1626 nt7.9□□□□□ -1.14
MSH1P25846 OCH1YGL038C 1443 nt7.9□□□□□ -1.14
MSH1P25846 RRT14YIL127C 621 nt7.9□□□□□ -1.14
MSH1P25846 YPC1YBR183W 951 nt7.9□□□□□ -1.14
MSH1P25846 EFM1YHL039W 1758 nt7.89□□□□□ -1.15
MSH1P25846 ICL2YPR006C 1728 nt7.89□□□□□ -1.15
MSH1P25846 MAM3YOL060C 2121 nt7.88□□□□□ -1.15
MSH1P25846 PAC10YGR078C 600 nt7.88□□□□□ -1.15
MSH1P25846 YHR033WYHR033W 1272 nt7.88□□□□□ -1.15
MSH1P25846 CAR2YLR438W 1275 nt7.88□□□□□ -1.15
MSH1P25846 LIP5YOR196C 1245 nt7.88□□□□□ -1.15
MSH1P25846 YEL023CYEL023C 2049 nt7.88□□□□□ -1.15
MSH1P25846 YCR041WYCR041W 333 nt7.87□□□□□ -1.15
MSH1P25846 YJL160CYJL160C 864 nt7.87□□□□□ -1.15
MSH1P25846 SNF7YLR025W 723 nt7.87□□□□□ -1.15
MSH1P25846 BUD20YLR074C 501 nt7.87□□□□□ -1.15
MSH1P25846 RTC2YBR147W 891 nt7.87□□□□□ -1.15
MSH1P25846 YJL045WYJL045W 1905 nt7.87□□□□□ -1.15
MSH1P25846 YDR215CYDR215C 414 nt7.85□□□□□ -1.15
MSH1P25846 CAK1YFL029C 1107 nt7.85□□□□□ -1.15
MSH1P25846 YGL260WYGL260W 231 nt7.85□□□□□ -1.15
MSH1P25846 ECM27YJR106W 2178 nt7.85□□□□□ -1.15
MSH1P25846 GRH1YDR517W 1119 nt7.84□□□□□ -1.15
MSH1P25846 YKL147CYKL147C 618 nt7.84□□□□□ -1.15
MSH1P25846 PUS5YLR165C 765 nt7.84□□□□□ -1.15
MSH1P25846 MFT1YML062C 1179 nt7.84□□□□□ -1.15
MSH1P25846 YAH1YPL252C 519 nt7.84□□□□□ -1.15
MSH1P25846 YKR023WYKR023W 1593 nt7.84□□□□□ -1.15
MSH1P25846 YPR084WYPR084W 1371 nt7.84□□□□□ -1.16
MSH1P25846 NUP84YDL116W 2181 nt7.82□□□□□ -1.16
MSH1P25846 YLR112WYLR112W 420 nt7.82□□□□□ -1.16
MSH1P25846 YOR343CYOR343C 327 nt7.82□□□□□ -1.16
MSH1P25846 ARG7YMR062C 1326 nt7.81□□□□□ -1.16
MSH1P25846 CDC3YLR314C 1563 nt7.81□□□□□ -1.16
MSH1P25846 YDR327WYDR327W 327 nt7.81□□□□□ -1.16
MSH1P25846 DAL80YKR034W 810 nt7.81□□□□□ -1.16
MSH1P25846 HDA1YNL021W 2121 nt7.81□□□□□ -1.16
MSH1P25846 MRP1YDR347W 966 nt7.8□□□□□ -1.16
MSH1P25846 YEL009C-AYEL009C-A 408 nt7.8□□□□□ -1.16
MSH1P25846 YPT31YER031C 672 nt7.8□□□□□ -1.16
MSH1P25846 MEU1YLR017W 1014 nt7.8□□□□□ -1.16
MSH1P25846 RRN10YBL025W 438 nt7.8□□□□□ -1.16
MSH1P25846 PRE10YOR362C 867 nt7.8□□□□□ -1.16
MSH1P25846 PAU21YOR394W 495 nt7.8□□□□□ -1.16
MSH1P25846 PAU22YPL282C 495 nt7.8□□□□□ -1.16
MSH1P25846 TIM50YPL063W 1431 nt7.79□□□□□ -1.16
MSH1P25846 YMR206WYMR206W 942 nt7.79□□□□□ -1.16
MSH1P25846 JHD1YER051W 1479 nt7.79□□□□□ -1.16
MSH1P25846 FHN1YGR131W 525 nt7.78□□□□□ -1.16
MSH1P25846 RMA1YKL132C 1293 nt7.78□□□□□ -1.16
MSH1P25846 SMK1YPR054W 1167 nt7.78□□□□□ -1.16
MSH1P25846 YER156CYER156C 1017 nt7.77□□□□□ -1.17
MSH1P25846 YML034C-AYML034C-A 399 nt7.77□□□□□ -1.17
MSH1P25846 YAL016C-AYAL016C-A 315 nt7.76□□□□□ -1.17
MSH1P25846 AFG3YER017C 2286 nt7.76□□□□□ -1.17
MSH1P25846 GDH1YOR375C 1365 nt7.75□□□□□ -1.17
MSH1P25846 CYB2YML054C 1776 nt7.75□□□□□ -1.17
MSH1P25846 PET18YCR020C 648 nt7.74□□□□□ -1.17
MSH1P25846 STF1YDL130W-A 261 nt7.74□□□□□ -1.17
MSH1P25846 NTG1YAL015C 1200 nt7.74□□□□□ -1.17
MSH1P25846 BXI1YNL305C 894 nt7.74□□□□□ -1.17
MSH1P25846 BAP3YDR046C 1815 nt7.73□□□□□ -1.17
MSH1P25846 AGP2YBR132C 1791 nt7.73□□□□□ -1.17
MSH1P25846 ADA2YDR448W 1305 nt7.73□□□□□ -1.17
MSH1P25846 YLL066CYLL066C 3618 nt7.72□□□□□ -1.17
MSH1P25846 TAD2YJL035C 753 nt7.72□□□□□ -1.17
MSH1P25846 ARC35YNR035C 1029 nt7.72□□□□□ -1.17
MSH1P25846 ACO1YLR304C 2337 nt7.72□□□□□ -1.17
MSH1P25846 ERS1YCR075C 783 nt7.71□□□□□ -1.18
MSH1P25846 CPR2YHR057C 618 nt7.71□□□□□ -1.18
MSH1P25846 VTS1YOR359W 1572 nt7.71□□□□□ -1.18
MSH1P25846 LCP5YER127W 1074 nt7.7□□□□□ -1.18
MSH1P25846 RPS6AYPL090C 711 nt7.7□□□□□ -1.18
MSH1P25846 RPS6BYBR181C 711 nt7.7□□□□□ -1.18
MSH1P25846 ECM30YLR436C 3825 nt7.69□□□□□ -1.18
MSH1P25846 RSP5YER125W 2430 nt7.69□□□□□ -1.18
MSH1P25846 GUT1YHL032C 2130 nt7.69□□□□□ -1.18
MSH1P25846 RPL2BYIL018W 765 nt7.69□□□□□ -1.18
MSH1P25846 PMU1YKL128C 888 nt7.69□□□□□ -1.18
MSH1P25846 GSH1YJL101C 2037 nt7.69□□□□□ -1.18
MSH1P25846 SKY1YMR216C 2229 nt7.68□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms