Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
PDGFBP01127 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.98■■□□□ 1.75
PDGFBP01127 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.98■■□□□ 1.75
PDGFBP01127 BHLHE23-202ENST00000612929 1109 ntBASIC25.97■■□□□ 1.75
PDGFBP01127 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PDGFBP01127 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PDGFBP01127 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.96■■□□□ 1.75
PDGFBP01127 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PDGFBP01127 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.96■■□□□ 1.75
PDGFBP01127 DUX4L9-201ENST00000449051 1259 ntBASIC25.95■■□□□ 1.74
PDGFBP01127 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
PDGFBP01127 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PDGFBP01127 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.95■■□□□ 1.74
PDGFBP01127 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDGFBP01127 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDGFBP01127 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDGFBP01127 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.94■■□□□ 1.74
PDGFBP01127 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
PDGFBP01127 RP9P-202ENST00000450133 1212 ntBASIC25.94■■□□□ 1.74
PDGFBP01127 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDGFBP01127 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PDGFBP01127 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.93■■□□□ 1.74
PDGFBP01127 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.93■■□□□ 1.74
PDGFBP01127 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PDGFBP01127 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.92■■□□□ 1.74
PDGFBP01127 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PDGFBP01127 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PDGFBP01127 GUSBP5-201ENST00000418136 578 ntBASIC25.92■■□□□ 1.74
PDGFBP01127 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDGFBP01127 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PDGFBP01127 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
PDGFBP01127 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 AC026202.3-201ENST00000600805 1127 ntBASIC25.9■■□□□ 1.74
PDGFBP01127 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
PDGFBP01127 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PDGFBP01127 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.89■■□□□ 1.74
PDGFBP01127 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDGFBP01127 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.89■■□□□ 1.74
PDGFBP01127 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PDGFBP01127 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
PDGFBP01127 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.88■■□□□ 1.73
PDGFBP01127 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.88■■□□□ 1.73
PDGFBP01127 AC103834.1-201ENST00000520383 144 ntBASIC25.88■■□□□ 1.73
PDGFBP01127 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PDGFBP01127 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.86■■□□□ 1.73
PDGFBP01127 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.86■■□□□ 1.73
PDGFBP01127 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.86■■□□□ 1.73
PDGFBP01127 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDGFBP01127 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PDGFBP01127 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.85■■□□□ 1.73
PDGFBP01127 SPCS2P3-201ENST00000500401 656 ntBASIC25.85■■□□□ 1.73
PDGFBP01127 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
PDGFBP01127 SMPD5-203ENST00000639008 1464 ntBASIC25.85■■□□□ 1.73
PDGFBP01127 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDGFBP01127 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDGFBP01127 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PDGFBP01127 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
PDGFBP01127 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.73
PDGFBP01127 YBX1P4-201ENST00000392794 808 ntBASIC25.82■■□□□ 1.72
PDGFBP01127 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PDGFBP01127 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.81■■□□□ 1.72
PDGFBP01127 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.81■■□□□ 1.72
PDGFBP01127 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.81■■□□□ 1.72
PDGFBP01127 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
PDGFBP01127 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
PDGFBP01127 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
PDGFBP01127 PVT1_1.1-201ENST00000615125 194 ntBASIC25.81■■□□□ 1.72
PDGFBP01127 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PDGFBP01127 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.8■■□□□ 1.72
PDGFBP01127 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PDGFBP01127 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.8■■□□□ 1.72
PDGFBP01127 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
PDGFBP01127 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.8■■□□□ 1.72
PDGFBP01127 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.8■■□□□ 1.72
PDGFBP01127 AC074183.2-201ENST00000623112 922 ntBASIC25.79■■□□□ 1.72
PDGFBP01127 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
PDGFBP01127 AL356441.2-201ENST00000443009 864 ntBASIC25.78■■□□□ 1.72
PDGFBP01127 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PDGFBP01127 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.78■■□□□ 1.72
PDGFBP01127 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
PDGFBP01127 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDGFBP01127 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PDGFBP01127 AC139795.1-202ENST00000500444 432 ntBASIC25.77■■□□□ 1.72
PDGFBP01127 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.77■■□□□ 1.72
PDGFBP01127 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDGFBP01127 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
PDGFBP01127 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.76■■□□□ 1.71
PDGFBP01127 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.76■■□□□ 1.71
PDGFBP01127 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms