Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.11■■□□□ 1.13
UPK1BO75841 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.1■■□□□ 1.13
UPK1BO75841 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
UPK1BO75841 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UPK1BO75841 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UPK1BO75841 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UPK1BO75841 AP004833.2-201ENST00000532228 1454 ntBASIC22.09■■□□□ 1.13
UPK1BO75841 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.08■■□□□ 1.13
UPK1BO75841 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
UPK1BO75841 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
UPK1BO75841 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
UPK1BO75841 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
UPK1BO75841 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.07■■□□□ 1.12
UPK1BO75841 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
UPK1BO75841 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UPK1BO75841 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UPK1BO75841 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.06■■□□□ 1.12
UPK1BO75841 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
UPK1BO75841 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UPK1BO75841 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UPK1BO75841 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
UPK1BO75841 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UPK1BO75841 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UPK1BO75841 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
UPK1BO75841 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.04■■□□□ 1.12
UPK1BO75841 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UPK1BO75841 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
UPK1BO75841 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UPK1BO75841 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.03■■□□□ 1.12
UPK1BO75841 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
UPK1BO75841 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UPK1BO75841 AC012676.1-201ENST00000574705 1949 ntBASIC22.02■■□□□ 1.12
UPK1BO75841 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
UPK1BO75841 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.02■■□□□ 1.12
UPK1BO75841 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
UPK1BO75841 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.02■■□□□ 1.11
UPK1BO75841 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.01■■□□□ 1.11
UPK1BO75841 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.01■■□□□ 1.11
UPK1BO75841 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1BO75841 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1BO75841 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UPK1BO75841 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
UPK1BO75841 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK1BO75841 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK1BO75841 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22■■□□□ 1.11
UPK1BO75841 AC010864.1-201ENST00000609407 1511 ntBASIC22■■□□□ 1.11
UPK1BO75841 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22■■□□□ 1.11
UPK1BO75841 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1BO75841 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1BO75841 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.99■■□□□ 1.11
UPK1BO75841 ERN1-208ENST00000606895 2068 ntBASIC21.99■■□□□ 1.11
UPK1BO75841 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
UPK1BO75841 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.99■■□□□ 1.11
UPK1BO75841 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UPK1BO75841 AC092803.2-201ENST00000564287 1899 ntBASIC21.98■■□□□ 1.11
UPK1BO75841 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.97■■□□□ 1.11
UPK1BO75841 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.97■■□□□ 1.11
UPK1BO75841 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPK1BO75841 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UPK1BO75841 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.96■■□□□ 1.11
UPK1BO75841 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.95■■□□□ 1.11
UPK1BO75841 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.95■■□□□ 1.1
UPK1BO75841 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1BO75841 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1BO75841 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1BO75841 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
UPK1BO75841 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1BO75841 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1BO75841 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UPK1BO75841 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK1BO75841 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK1BO75841 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK1BO75841 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
UPK1BO75841 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPK1BO75841 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.94■■□□□ 1.1
UPK1BO75841 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.94■■□□□ 1.1
UPK1BO75841 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
UPK1BO75841 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
UPK1BO75841 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPK1BO75841 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1BO75841 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1BO75841 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1BO75841 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
UPK1BO75841 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
UPK1BO75841 LINC00543-201ENST00000567234 1845 ntBASIC21.92■■□□□ 1.1
UPK1BO75841 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.91■■□□□ 1.1
UPK1BO75841 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
UPK1BO75841 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.91■■□□□ 1.1
UPK1BO75841 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
UPK1BO75841 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
UPK1BO75841 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1BO75841 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1BO75841 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
UPK1BO75841 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
UPK1BO75841 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
UPK1BO75841 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
UPK1BO75841 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
UPK1BO75841 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.89■■□□□ 1.09
UPK1BO75841 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.89■■□□□ 1.09
UPK1BO75841 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms