Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCGB2A1O75556 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCGB2A1O75556 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCGB2A1O75556 MIR6090-201ENST00000622481 60 ntBASIC19.71■□□□□ 0.75
SCGB2A1O75556 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCGB2A1O75556 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCGB2A1O75556 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SCGB2A1O75556 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCGB2A1O75556 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCGB2A1O75556 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCGB2A1O75556 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SCGB2A1O75556 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.69■□□□□ 0.74
SCGB2A1O75556 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.69■□□□□ 0.74
SCGB2A1O75556 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB2A1O75556 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB2A1O75556 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCGB2A1O75556 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB2A1O75556 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB2A1O75556 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SCGB2A1O75556 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB2A1O75556 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB2A1O75556 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB2A1O75556 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCGB2A1O75556 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCGB2A1O75556 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SCGB2A1O75556 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCGB2A1O75556 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCGB2A1O75556 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.67■□□□□ 0.74
SCGB2A1O75556 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.67■□□□□ 0.74
SCGB2A1O75556 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.66■□□□□ 0.74
SCGB2A1O75556 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.66■□□□□ 0.74
SCGB2A1O75556 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCGB2A1O75556 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCGB2A1O75556 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.66■□□□□ 0.74
SCGB2A1O75556 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCGB2A1O75556 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCGB2A1O75556 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.66■□□□□ 0.74
SCGB2A1O75556 AC018358.1-201ENST00000631079 1402 ntBASIC19.66■□□□□ 0.74
SCGB2A1O75556 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SCGB2A1O75556 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SCGB2A1O75556 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.65■□□□□ 0.74
SCGB2A1O75556 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB2A1O75556 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB2A1O75556 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB2A1O75556 WHAMMP2-203ENST00000563942 1603 ntBASIC19.65■□□□□ 0.74
SCGB2A1O75556 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCGB2A1O75556 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.64■□□□□ 0.73
SCGB2A1O75556 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SCGB2A1O75556 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCGB2A1O75556 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
SCGB2A1O75556 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCGB2A1O75556 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.63■□□□□ 0.73
SCGB2A1O75556 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCGB2A1O75556 AC087741.3-201ENST00000624270 1347 ntBASIC19.63■□□□□ 0.73
SCGB2A1O75556 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCGB2A1O75556 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCGB2A1O75556 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.63■□□□□ 0.73
SCGB2A1O75556 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCGB2A1O75556 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SCGB2A1O75556 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCGB2A1O75556 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SCGB2A1O75556 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCGB2A1O75556 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCGB2A1O75556 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCGB2A1O75556 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.6■□□□□ 0.73
SCGB2A1O75556 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCGB2A1O75556 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.6■□□□□ 0.73
SCGB2A1O75556 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCGB2A1O75556 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCGB2A1O75556 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SCGB2A1O75556 AL121749.1-202ENST00000609313 2153 ntBASIC19.6■□□□□ 0.73
SCGB2A1O75556 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.59■□□□□ 0.73
SCGB2A1O75556 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCGB2A1O75556 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.59■□□□□ 0.73
SCGB2A1O75556 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SCGB2A1O75556 AL162393.1-201ENST00000437852 946 ntBASIC19.59■□□□□ 0.73
SCGB2A1O75556 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SCGB2A1O75556 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCGB2A1O75556 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCGB2A1O75556 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCGB2A1O75556 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCGB2A1O75556 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.58■□□□□ 0.72
SCGB2A1O75556 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SCGB2A1O75556 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.57■□□□□ 0.72
SCGB2A1O75556 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SCGB2A1O75556 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SCGB2A1O75556 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms