Protein–RNA interactions for Protein: O15446

CD3EAP, DNA-directed RNA polymerase I subunit RPA34, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3EAPO15446 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CD3EAPO15446 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CD3EAPO15446 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.11■■□□□ 1.61
CD3EAPO15446 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CD3EAPO15446 AL121749.1-202ENST00000609313 2153 ntBASIC25.11■■□□□ 1.61
CD3EAPO15446 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CD3EAPO15446 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.1■■□□□ 1.61
CD3EAPO15446 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.1■■□□□ 1.61
CD3EAPO15446 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.1■■□□□ 1.61
CD3EAPO15446 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
CD3EAPO15446 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.09■■□□□ 1.61
CD3EAPO15446 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.09■■□□□ 1.61
CD3EAPO15446 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CD3EAPO15446 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CD3EAPO15446 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
CD3EAPO15446 ZNRF2P2-203ENST00000454624 420 ntBASIC25.08■■□□□ 1.61
CD3EAPO15446 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CD3EAPO15446 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CD3EAPO15446 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
CD3EAPO15446 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CD3EAPO15446 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.07■■□□□ 1.6
CD3EAPO15446 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CD3EAPO15446 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CD3EAPO15446 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CD3EAPO15446 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.06■■□□□ 1.6
CD3EAPO15446 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CD3EAPO15446 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD3EAPO15446 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD3EAPO15446 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD3EAPO15446 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.05■■□□□ 1.6
CD3EAPO15446 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.05■■□□□ 1.6
CD3EAPO15446 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CD3EAPO15446 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CD3EAPO15446 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CD3EAPO15446 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L13-201ENST00000554103 1267 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L15-201ENST00000611059 1267 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L23-201ENST00000615195 1269 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L24-201ENST00000617576 1269 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L22-201ENST00000618238 1269 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L20-201ENST00000619712 1269 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L21-201ENST00000622058 1269 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L10-201ENST00000622460 1267 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L25-201ENST00000624915 1269 ntBASIC25.04■■□□□ 1.6
CD3EAPO15446 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CD3EAPO15446 DUX4L11-201ENST00000611504 1267 ntBASIC25.03■■□□□ 1.6
CD3EAPO15446 DUX4L12-201ENST00000614593 1267 ntBASIC25.03■■□□□ 1.6
CD3EAPO15446 DUX4L14-201ENST00000621227 1267 ntBASIC25.03■■□□□ 1.6
CD3EAPO15446 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CD3EAPO15446 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 ABHD17AP4-201ENST00000411545 909 ntBASIC25.02■■□□□ 1.6
CD3EAPO15446 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CD3EAPO15446 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CD3EAPO15446 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CD3EAPO15446 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CD3EAPO15446 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25■■□□□ 1.59
CD3EAPO15446 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25■■□□□ 1.59
CD3EAPO15446 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25■■□□□ 1.59
CD3EAPO15446 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CD3EAPO15446 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CD3EAPO15446 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25■■□□□ 1.59
CD3EAPO15446 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD3EAPO15446 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CD3EAPO15446 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD3EAPO15446 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD3EAPO15446 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD3EAPO15446 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CD3EAPO15446 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD3EAPO15446 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD3EAPO15446 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.98■■□□□ 1.59
CD3EAPO15446 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.98■■□□□ 1.59
CD3EAPO15446 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CD3EAPO15446 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.96■■□□□ 1.59
CD3EAPO15446 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CD3EAPO15446 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CD3EAPO15446 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
CD3EAPO15446 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.96■■□□□ 1.59
CD3EAPO15446 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CD3EAPO15446 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.95■■□□□ 1.58
CD3EAPO15446 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.95■■□□□ 1.58
CD3EAPO15446 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CD3EAPO15446 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CD3EAPO15446 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.94■■□□□ 1.58
CD3EAPO15446 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.94■■□□□ 1.58
CD3EAPO15446 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CD3EAPO15446 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.93■■□□□ 1.58
CD3EAPO15446 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CD3EAPO15446 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.92■■□□□ 1.58
CD3EAPO15446 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.92■■□□□ 1.58
CD3EAPO15446 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
CD3EAPO15446 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
CD3EAPO15446 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CD3EAPO15446 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.91■■□□□ 1.58
CD3EAPO15446 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CD3EAPO15446 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms