Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC100797.4-201ENST00000631653 1827 ntBASIC25.61■■□□□ 1.69
NPC1O15118 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.61■■□□□ 1.69
NPC1O15118 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NPC1O15118 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NPC1O15118 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.61■■□□□ 1.69
NPC1O15118 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.6■■□□□ 1.69
NPC1O15118 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
NPC1O15118 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.6■■□□□ 1.69
NPC1O15118 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
NPC1O15118 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NPC1O15118 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NPC1O15118 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NPC1O15118 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NPC1O15118 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
NPC1O15118 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
NPC1O15118 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPC1O15118 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NPC1O15118 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
NPC1O15118 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.58■■□□□ 1.69
NPC1O15118 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPC1O15118 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NPC1O15118 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NPC1O15118 AC012354.3-201ENST00000623734 483 ntBASIC25.56■■□□□ 1.68
NPC1O15118 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.56■■□□□ 1.68
NPC1O15118 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
NPC1O15118 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.56■■□□□ 1.68
NPC1O15118 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NPC1O15118 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
NPC1O15118 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
NPC1O15118 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
NPC1O15118 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.55■■□□□ 1.68
NPC1O15118 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NPC1O15118 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.55■■□□□ 1.68
NPC1O15118 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.55■■□□□ 1.68
NPC1O15118 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
NPC1O15118 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NPC1O15118 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NPC1O15118 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.54■■□□□ 1.68
NPC1O15118 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NPC1O15118 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
NPC1O15118 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
NPC1O15118 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NPC1O15118 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.53■■□□□ 1.68
NPC1O15118 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
NPC1O15118 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NPC1O15118 AL139393.2-201ENST00000608721 2025 ntBASIC25.53■■□□□ 1.68
NPC1O15118 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
NPC1O15118 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.52■■□□□ 1.68
NPC1O15118 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
NPC1O15118 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NPC1O15118 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
NPC1O15118 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
NPC1O15118 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NPC1O15118 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.5■■□□□ 1.67
NPC1O15118 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.5■■□□□ 1.67
NPC1O15118 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
NPC1O15118 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
NPC1O15118 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NPC1O15118 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.49■■□□□ 1.67
NPC1O15118 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
NPC1O15118 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.49■■□□□ 1.67
NPC1O15118 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.49■■□□□ 1.67
NPC1O15118 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NPC1O15118 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPC1O15118 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.48■■□□□ 1.67
NPC1O15118 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPC1O15118 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
NPC1O15118 U85056.1-201ENST00000616429 682 ntBASIC25.48■■□□□ 1.67
NPC1O15118 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPC1O15118 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
NPC1O15118 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NPC1O15118 AL157400.5-201ENST00000507624 621 ntBASIC25.47■■□□□ 1.67
NPC1O15118 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.47■■□□□ 1.67
NPC1O15118 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
NPC1O15118 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NPC1O15118 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.46■■□□□ 1.67
NPC1O15118 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
NPC1O15118 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.46■■□□□ 1.67
NPC1O15118 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
NPC1O15118 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.46■■□□□ 1.67
NPC1O15118 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NPC1O15118 AP002414.2-202ENST00000590929 1450 ntBASIC25.46■■□□□ 1.67
NPC1O15118 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
NPC1O15118 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.45■■□□□ 1.67
NPC1O15118 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.45■■□□□ 1.66
NPC1O15118 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
NPC1O15118 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NPC1O15118 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NPC1O15118 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
NPC1O15118 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
NPC1O15118 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
NPC1O15118 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.44■■□□□ 1.66
NPC1O15118 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.44■■□□□ 1.66
NPC1O15118 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.44■■□□□ 1.66
NPC1O15118 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
NPC1O15118 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NPC1O15118 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NPC1O15118 ABCB10P3-201ENST00000561950 2166 ntBASIC25.42■■□□□ 1.66
NPC1O15118 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NPC1O15118 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms