Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDX4O14627 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.84■■□□□ 1.57
CDX4O14627 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDX4O14627 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDX4O14627 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.83■■□□□ 1.57
CDX4O14627 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDX4O14627 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.82■■□□□ 1.56
CDX4O14627 AC019069.1-201ENST00000610008 1333 ntBASIC24.82■■□□□ 1.56
CDX4O14627 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CDX4O14627 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDX4O14627 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CDX4O14627 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.81■■□□□ 1.56
CDX4O14627 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.81■■□□□ 1.56
CDX4O14627 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CDX4O14627 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDX4O14627 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.79■■□□□ 1.56
CDX4O14627 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CDX4O14627 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDX4O14627 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDX4O14627 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CDX4O14627 SMPD5-203ENST00000639008 1464 ntBASIC24.77■■□□□ 1.56
CDX4O14627 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.77■■□□□ 1.56
CDX4O14627 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.77■■□□□ 1.56
CDX4O14627 AC026202.3-201ENST00000600805 1127 ntBASIC24.77■■□□□ 1.56
CDX4O14627 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDX4O14627 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDX4O14627 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.76■■□□□ 1.55
CDX4O14627 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDX4O14627 AL135925.1-201ENST00000605920 1701 ntBASIC24.76■■□□□ 1.55
CDX4O14627 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDX4O14627 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.76■■□□□ 1.55
CDX4O14627 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.76■■□□□ 1.55
CDX4O14627 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
CDX4O14627 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
CDX4O14627 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CDX4O14627 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.75■■□□□ 1.55
CDX4O14627 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDX4O14627 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.74■■□□□ 1.55
CDX4O14627 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.74■■□□□ 1.55
CDX4O14627 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDX4O14627 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CDX4O14627 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.74■■□□□ 1.55
CDX4O14627 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CDX4O14627 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CDX4O14627 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
CDX4O14627 DUX4L9-201ENST00000449051 1259 ntBASIC24.73■■□□□ 1.55
CDX4O14627 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.73■■□□□ 1.55
CDX4O14627 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDX4O14627 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CDX4O14627 AC010980.1-201ENST00000587192 1142 ntBASIC24.72■■□□□ 1.55
CDX4O14627 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDX4O14627 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDX4O14627 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CDX4O14627 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.71■■□□□ 1.55
CDX4O14627 BHLHE23-202ENST00000612929 1109 ntBASIC24.71■■□□□ 1.55
CDX4O14627 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
CDX4O14627 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
CDX4O14627 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.7■■□□□ 1.54
CDX4O14627 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CDX4O14627 AC009299.2-201ENST00000482477 511 ntBASIC24.7■■□□□ 1.54
CDX4O14627 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.7■■□□□ 1.54
CDX4O14627 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.54
CDX4O14627 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.7■■□□□ 1.54
CDX4O14627 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CDX4O14627 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
CDX4O14627 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CDX4O14627 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.69■■□□□ 1.54
CDX4O14627 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.69■■□□□ 1.54
CDX4O14627 KRT8P33-201ENST00000508125 1423 ntBASIC24.69■■□□□ 1.54
CDX4O14627 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDX4O14627 RP9P-202ENST00000450133 1212 ntBASIC24.68■■□□□ 1.54
CDX4O14627 AC074183.2-201ENST00000623112 922 ntBASIC24.68■■□□□ 1.54
CDX4O14627 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CDX4O14627 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDX4O14627 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CDX4O14627 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CDX4O14627 AC131212.1-201ENST00000613771 668 ntBASIC24.66■■□□□ 1.54
CDX4O14627 SPCS2P3-201ENST00000500401 656 ntBASIC24.65■■□□□ 1.54
CDX4O14627 AC025884.2-201ENST00000553429 711 ntBASIC24.65■■□□□ 1.54
CDX4O14627 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CDX4O14627 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.65■■□□□ 1.54
CDX4O14627 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.64■■□□□ 1.54
CDX4O14627 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CDX4O14627 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CDX4O14627 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.63■■□□□ 1.53
CDX4O14627 AC103834.1-201ENST00000520383 144 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms