Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF11BO00300 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.18■■□□□ 1.3
TNFRSF11BO00300 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF11BO00300 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11BO00300 AC135983.2-203ENST00000454486 1613 ntBASIC23.17■■□□□ 1.3
TNFRSF11BO00300 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TNFRSF11BO00300 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 MIR762-201ENST00000390236 83 ntBASIC23.16■■□□□ 1.3
TNFRSF11BO00300 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TNFRSF11BO00300 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11BO00300 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11BO00300 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11BO00300 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.15■■□□□ 1.3
TNFRSF11BO00300 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11BO00300 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TNFRSF11BO00300 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11BO00300 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.14■■□□□ 1.29
TNFRSF11BO00300 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TNFRSF11BO00300 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TNFRSF11BO00300 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.14■■□□□ 1.29
TNFRSF11BO00300 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11BO00300 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TNFRSF11BO00300 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TNFRSF11BO00300 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TNFRSF11BO00300 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.12■■□□□ 1.29
TNFRSF11BO00300 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.11■■□□□ 1.29
TNFRSF11BO00300 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.11■■□□□ 1.29
TNFRSF11BO00300 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.11■■□□□ 1.29
TNFRSF11BO00300 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
TNFRSF11BO00300 AC145676.1-201ENST00000514988 2004 ntBASIC23.11■■□□□ 1.29
TNFRSF11BO00300 WHAMMP2-203ENST00000563942 1603 ntBASIC23.11■■□□□ 1.29
TNFRSF11BO00300 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TNFRSF11BO00300 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF11BO00300 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF11BO00300 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.1■■□□□ 1.29
TNFRSF11BO00300 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF11BO00300 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TNFRSF11BO00300 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.09■■□□□ 1.29
TNFRSF11BO00300 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.08■■□□□ 1.29
TNFRSF11BO00300 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF11BO00300 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.08■■□□□ 1.29
TNFRSF11BO00300 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.08■■□□□ 1.29
TNFRSF11BO00300 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF11BO00300 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFRSF11BO00300 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF11BO00300 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF11BO00300 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF11BO00300 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TNFRSF11BO00300 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF11BO00300 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF11BO00300 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF11BO00300 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF11BO00300 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TNFRSF11BO00300 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TNFRSF11BO00300 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TNFRSF11BO00300 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF11BO00300 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFRSF11BO00300 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.04■■□□□ 1.28
TNFRSF11BO00300 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF11BO00300 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.03■■□□□ 1.28
TNFRSF11BO00300 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.03■■□□□ 1.28
TNFRSF11BO00300 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TNFRSF11BO00300 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFRSF11BO00300 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.01■■□□□ 1.27
TNFRSF11BO00300 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF11BO00300 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFRSF11BO00300 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
TNFRSF11BO00300 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
TNFRSF11BO00300 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFRSF11BO00300 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23■■□□□ 1.27
TNFRSF11BO00300 AC020928.2-201ENST00000588717 2197 ntBASIC23■■□□□ 1.27
TNFRSF11BO00300 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TNFRSF11BO00300 AC108673.1-201ENST00000510422 1159 ntBASIC22.99■■□□□ 1.27
TNFRSF11BO00300 AC005559.1-201ENST00000589661 871 ntBASIC22.99■■□□□ 1.27
TNFRSF11BO00300 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms